Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2852 ATGAAAATGTTGTTGCTTGGCACTAAGAAAATGTTCCTCCAAATTCTTTGGTGTTTTTCACTGATTAGTCTTAGTTCCCAAACGAGGAGTCATTACAACTTTGTTGTGAGAGAAGCCCGGTACACAAGACTGTGTTCCACAAAGAGCATTTTGACGGTGAATGGAAGATTTCCAGGGCCAGCTATAAAAGTCTACAAGGGTGACACAATCTATGTTAATGTTCACAACAGGGGAAAAAATAACATCACTATACACTGGCATGGAGTGAAACAACCAAGAAATCCATGGACAGATGGTCCTGAATACATAACTCAATGCCCCATTCAACCAGGAAGGAGTTTCAGACAAAAGATAGTATTTTCAACAGAAGAAGGGACCTTATGGTGGCATGCTCATAGTGATTGGTCAAGAGCCACCGTCCATGGCCCAATCTATATCTATCCAAAGAAGAATAGTAGTGGCTATCCTTTTCCCAAACCTCACTATGAGGTCCCCATCATACTTGGAGAGTGGTGGAAGAGTGATCTCAACAAGGTCTTCACACAATTTATTAAAAGTGGAGGAGCGCCAAACAATTCTGATGCTGTCACCATTAATGGCCAACCTGGAGATCTCTATAATTGCTCAAAATCTGGGACATTCAAGTTAAATGTAGAGCATGGCAAGACCTACCATCTGCGCATAATTAATGCGGCAATGAATCTGATCCTGTTTTTCTCAGTCTCCAAACACAACCTAACACTGTTTGCTCATGATGCAATGTACACAAAGGAATTAACAACTTCTTACATTTGCATAGCTCCTGGTCAAACAATGGATGTATTATTGCATGCAAACCAAAACCCTAACAACAAATATTACATGGCTGCAAGGGCTTATTCAACTGGGGTTGGAGTTCCATTTGATAACTCCACAACCACAGCTATAATCCAATACAATAATAATAATAATAATAATGAAAATTCAACTCCTTCCTTTCCTTTTCTTCCAAGCCCTAATGACACAAAATCAGCTTTTGCTTTCATTAGAAGAATTAGGGGCTACCCTGAAGAAAACCCTTTTACATGCCCTTTAAATATCAAAACTCACATACTTACCACAATTTCTGTGAACACTTTTCCATGCCCTAGAGGCCGATCACCATCCTCATGCCAAGCACCGAATTCGACGATTTTCGCCGCCAGCATGAACAACATAAGCTTTGTAACCCCACGCACTGATATCCTGGAAGCCTACTACTACCACATCAATGGAGTTTATAGAAAGGGTTTTCCGAGTTTCCCGCCATATGTGTTCAACTTCACTGGGGATTACTTGCCTCTTGAACTCAACATACCAAAGAGAGGGACAAAGGTTAAGGTTTTGAAGTACGGTTCAACGGTGGAGCTTGTTTTCCAAGGGACCAACTTGGTTGCTGGCATAGACCATCCAATGCATATACATGGATTCAGTTTTCATGTTATTGGTTATGGTTTTGGGAATTTCAACAAGAGCGTGGACCCCAAGAATTATAATCTTGTTGATCCTCCTCTTCAGAATACTGTCATTGTGCCCATTAAAGGCTGGGCTGCCATTAGGTTTAGGGCTACCAACCCTGGAGTGTGGTTTATGCATTGCCACCTTGACCGGCACCTCTCCTGGGGCATGGAGACAGTGTTTATTGTGAAGAATGGCAAAGCCTCAAATGAAACATTACCTCCTCCACCACCAGACATGCCTCCATGTTAA 1728 0.4178 MKMLLLGTKKMFLQILWCFSLISLSSQTRSHYNFVVREARYTRLCSTKSILTVNGRFPGPAIKVYKGDTIYVNVHNRGKNNITIHWHGVKQPRNPWTDGPEYITQCPIQPGRSFRQKIVFSTEEGTLWWHAHSDWSRATVHGPIYIYPKKNSSGYPFPKPHYEVPIILGEWWKSDLNKVFTQFIKSGGAPNNSDAVTINGQPGDLYNCSKSGTFKLNVEHGKTYHLRIINAAMNLILFFSVSKHNLTLFAHDAMYTKELTTSYICIAPGQTMDVLLHANQNPNNKYYMAARAYSTGVGVPFDNSTTTAIIQYNNNNNNNENSTPSFPFLPSPNDTKSAFAFIRRIRGYPEENPFTCPLNIKTHILTTISVNTFPCPRGRSPSSCQAPNSTIFAASMNNISFVTPRTDILEAYYYHINGVYRKGFPSFPPYVFNFTGDYLPLELNIPKRGTKVKVLKYGSTVELVFQGTNLVAGIDHPMHIHGFSFHVIGYGFGNFNKSVDPKNYNLVDPPLQNTVIVPIKGWAAIRFRATNPGVWFMHCHLDRHLSWGMETVFIVKNGKASNETLPPPPPDMPPC* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2852 575 CDD CuRO_1_LCC_plant 32 148 IPR034288 GO:0005507
Ahy9g2852 575 TIGRFAM laccase: laccase 30 575 IPR017761 GO:0046274|GO:0048046|GO:0052716
Ahy9g2852 575 Pfam Multicopper oxidase 36 150 IPR011707 GO:0005507
Ahy9g2852 575 ProSitePatterns Multicopper oxidases signature 1. 533 553 IPR033138 -
Ahy9g2852 575 PANTHER MULTI-COPPER OXIDASE 35 575 IPR045087 -
Ahy9g2852 575 CDD CuRO_2_LCC_plant 164 312 IPR034285 -
Ahy9g2852 575 SUPERFAMILY Cupredoxins 28 173 IPR008972 -
Ahy9g2852 575 Gene3D - 380 575 IPR008972 -
Ahy9g2852 575 Gene3D - 19 148 IPR008972 -
Ahy9g2852 575 Gene3D - 161 348 IPR008972 -
Ahy9g2852 575 SUPERFAMILY Cupredoxins 386 575 IPR008972 -
Ahy9g2852 575 Pfam Multicopper oxidase 164 315 IPR001117 -
Ahy9g2852 575 Pfam Multicopper oxidase 444 558 IPR011706 GO:0005507|GO:0016491
Ahy9g2852 575 ProSitePatterns Multicopper oxidases signature 2. 538 549 IPR002355 GO:0005507
Ahy9g2852 575 SUPERFAMILY Cupredoxins 157 346 IPR008972 -
Ahy9g2852 575 PANTHER LACCASE-15 35 575 - -
Ahy9g2852 575 CDD CuRO_3_LCC_plant 419 558 IPR034289 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2852 Ahy-Chr9 117634685 117640085 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2852 K05909 K19791 gmx:100817468 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2744 19 148933333 148936056 Ahy9g2852 9 117634685 117640085 hybridization
Ahy5g3295 5 114991894 114994639 Ahy9g2852 9 117634685 117640085 PCT
Ahy9g2852 9 117634685 117640085 Ahy5g3295 5 114991894 114994639 PCT