Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2744 ATGAAAATCCTCACTAGCTTAGGAATATTATTGTTTCTCAATGTCATTCTAGTTACTTGCCAAGCAATGCGGCACCATAAGTTTGTGGTGAGAGATGCTTCCTTCACAAAGCTTTGCAGCACAAAAAATATCTTAACAGTAAATGGAGAATTTCCAGGGCCAACATTGTATGTTACAAAAGGAGAAAGCATAATTGTTGATGTGTATAACAGAGCTAACTATAACATCACCATTCACTGGCATGGAGTGAACCAACCAAGATATCCATGGTCTGATGGCCCTGAATTCATCACTCAATGTCCCATTCAACCTGGTGGTTTGTTCTCTCAAAAGGTTATCTTTTCTGAAGAGGAAGGCACACTTTGGTGGCATGCTCACAGTGATTGGTCTCGTGCTACTGTTCACGGTGCTATTGTCATTAAACCCAAGCCTGGAAATACATATCCATTTCCAAAACCACACAAAGAGGTCCCCATTGTACTAGGTGAATGGTGGAAGGAAGACATTGTCCAAGTTTTCAATAACTTTGAAACGGGGGGAGGAGATCCCGTTGTTTCAGATGCTTATACTATCAATGGCCAACCTGGTGATCTTTATAATTGCTCAAACAAAGAAACCTTCAAAGTAAATGTGGAACATGGCAAGACATATCTTCTGAGAATGGTGCATGCTGGAATGCAAGACCTTCTCTTCTTTGGAATTGCGAAGCACCAATTGACAGTGGTGGGAAGCGATGGAAGCTATGTGAAGCCATTCAAAGTGGATTACATAACAATATCACCAGGTCAAACCATGGATGTGTTGCTTGAAGCTAATCAACCTTTGGATCGTTATTACATGGCTGCCAAAGTGTATTCAAGTGCTTCCAATGTTGCATTTGACAACACAACCACCACAGCCATTCTGCAATACAAAAAGGGAAAACACATTATTCCATCATTTTCATCAAGAACCCCTCACATGCCTTCACTTCCATCTTCCAATGACACCAATGCATCTATCAACATGATAAGTCAAATGAGAAGCTTAGCAGATGAAGCACATCCAATTGACGTGCCATTGAACATAACCACCAACCTGTTCTACACAGTTTCGGTGAATACATTACCATGTTCAACATGCGAAGGTAGTCATATACCAGGGAACCGCCTTGCAGCAAGTGTAAATAACATAAGCTTCCAATTGCCATCGGGAAACAACATTTTGAATGCTTACTATAACCACCTTCAAGGTGTATATACACAAGATTTTCCAGATGTGCCACCAGAACTATTTGATTTCACTGCTTCCAATTTGTCCACATTTCTTAGAACTCCATCGGTAGATACAGAGGTGAAGGTGCTTGAGTATGGGTCCACGGTGGAGCTTGTTCTTCAAGGGACTAATTTGCTGGCTGGTACTGAGCATCCAATGCACTTGCATGGCCATAGTTTCTATGTAGTTGGATGGGGATTCGGAAACTTTGACAAAGACAAAGATCCTCTCACATATAATCTTGTTGATCCTCCTTATCAGAATACCGTCGCTATACCCAAAAATGGATGGGTAACCATAAGATTCAAGACACAAAATCCAGGTGTGTGGTTCATGCATTGCCACTTAGAGCGACATCTGAGTTGGGGAATGGCTATGACTTTCATTGTCAAAAATGGAAAGAATCCTGAAGAGAAGATGTTGCCACCACCACGAGACATGCCACACTGTTAA 1707 0.4148 MKILTSLGILLFLNVILVTCQAMRHHKFVVRDASFTKLCSTKNILTVNGEFPGPTLYVTKGESIIVDVYNRANYNITIHWHGVNQPRYPWSDGPEFITQCPIQPGGLFSQKVIFSEEEGTLWWHAHSDWSRATVHGAIVIKPKPGNTYPFPKPHKEVPIVLGEWWKEDIVQVFNNFETGGGDPVVSDAYTINGQPGDLYNCSNKETFKVNVEHGKTYLLRMVHAGMQDLLFFGIAKHQLTVVGSDGSYVKPFKVDYITISPGQTMDVLLEANQPLDRYYMAAKVYSSASNVAFDNTTTTAILQYKKGKHIIPSFSSRTPHMPSLPSSNDTNASINMISQMRSLADEAHPIDVPLNITTNLFYTVSVNTLPCSTCEGSHIPGNRLAASVNNISFQLPSGNNILNAYYNHLQGVYTQDFPDVPPELFDFTASNLSTFLRTPSVDTEVKVLEYGSTVELVLQGTNLLAGTEHPMHLHGHSFYVVGWGFGNFDKDKDPLTYNLVDPPYQNTVAIPKNGWVTIRFKTQNPGVWFMHCHLERHLSWGMAMTFIVKNGKNPEEKMLPPPRDMPHC* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2744 568 Pfam Multicopper oxidase 156 306 IPR001117 -
Ahy19g2744 568 Gene3D - 154 345 IPR008972 -
Ahy19g2744 568 Gene3D - 23 151 IPR008972 -
Ahy19g2744 568 ProSitePatterns Multicopper oxidases signature 1. 526 546 IPR033138 -
Ahy19g2744 568 TIGRFAM laccase: laccase 23 568 IPR017761 GO:0046274|GO:0048046|GO:0052716
Ahy19g2744 568 SUPERFAMILY Cupredoxins 150 344 IPR008972 -
Ahy19g2744 568 CDD CuRO_2_LCC_plant 157 304 IPR034285 -
Ahy19g2744 568 SUPERFAMILY Cupredoxins 22 167 IPR008972 -
Ahy19g2744 568 CDD CuRO_1_LCC_plant 26 142 IPR034288 GO:0005507
Ahy19g2744 568 PANTHER LACCASE 11 568 - -
Ahy19g2744 568 CDD CuRO_3_LCC_plant 412 551 IPR034289 GO:0005507
Ahy19g2744 568 Pfam Multicopper oxidase 418 551 IPR011706 GO:0005507|GO:0016491
Ahy19g2744 568 Pfam Multicopper oxidase 32 143 IPR011707 GO:0005507
Ahy19g2744 568 Gene3D - 372 568 IPR008972 -
Ahy19g2744 568 SUPERFAMILY Cupredoxins 378 568 IPR008972 -
Ahy19g2744 568 PANTHER MULTI-COPPER OXIDASE 11 568 IPR045087 -
Ahy19g2744 568 ProSitePatterns Multicopper oxidases signature 2. 531 542 IPR002355 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2744 Ahy-Chr19 148933333 148936056 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2744 K05909 - qsu:112034097 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2744 19 148933333 148936056 Ahy19g2744 19 148933333 148936056 ECH
Ahy19g2744 19 148933333 148936056 Ahy9g2852 9 117634685 117640085 hybridization
Ahy5g3295 5 114991894 114994639 Ahy19g2744 19 148933333 148936056 PCT
Ahy19g2744 19 148933333 148936056 Ahy5g3295 5 114991894 114994639 PCT