Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3295 ATGAAAATGTTGTTGCTTGGGAAGAAAACTATCTTCCTACAAATTCTTTGGAGTTTTTTCTTCGTTGTTGGTATCAATTCCCAAAGGCCAAGAGAGTACCATTTTGTTGTGAGAGAAGCTAAGTACACAAGACTATGCTGCACCAAAACATTGTTGACTGTGAATGGAAGATTTCCAGGGCCAATTATTAAAGCCTACACAGGTGAAACAGTATATGTCAATGTCTATAACAAGGGGGAATTCAACATCACTTTGCACTGGCATGGAGTGAAGCAGCCAAGAAATCCATGGTCAGATGGCCCTGAATACATCACACAATGCCCTATCCAACCAGGAATGAAATTCAGGCAAAAGGTGATTTTTTCTTTTGAACAAGGGACATTATGGTGGCATGCACATAGTGATTGGGCAAGAGCCACTGTCCATGGACCTATCTTTGTGTATCCAAGAACATCCTACCCTTTTCCCAAGCCTTATGCAGAGGTTCCTATTGTATTTGAATGGTGGAAGAGTGAAATCAAGGATGTTTATGAACAATTTGTTATAAGTGGAGGAAGCCCTATTAATTCTGATGCTCTCACTATCAATGGTCAACCTGGTGACTTTTTTCCTTGCTCAAGAGAAGAAACATTCAAGTTTAATGTAGATTTTGGCAAGACTTATCTGCTGAGGATTGTGAATGCTGCAATGAATGTAGTTCTCTTTTTCTCTGTTTACAAACACAGTCTCACTGTTGTTGGTGCTGATGCTGCCTACACCGAGCCATTAACAAGAGACTTCATATGCATAGCTCCAGGACAATCACTTGATGTTTTGTTGCATGCAAATCAAGAACCTGATCACTATTACATGGCTGCAAGAGCATATTCAAGTTCCTCTATTCTTCCTTTTGATAACACCACAACCACAGCTAGAATCCACTACAATGGATATTACATTCCAACTTCATCACCTCCATTACCTTGTCTTCCTTACTACAATGACACAAATGCAGCTTTTGATTTCTTGGGAAGCCTTAGAGGCAAACCTGAGACATACCCTCATAAAGTCCCAACAATAATCACAACTCGAATCATTAGCACTATTTCTATCAACACATTCCCATGCCCTGAAGGCCAGACATTTTCACAAACATGTGAAGGGCCAAATGGAACACGTTTAGCAGCTAGCATGAACAACATATCCTTTGAGTTACCAAACATTTCCATCTTGGATGCATATTATTACTACTTAAATGGTGTCTACAGTAATAATTTCCCTAGTTTTCCTCCTTTGGTATTCAACTTCACTGCAGAGTATTTGCCAATGATACTAGAGATACCAAAGAGAAGAACCATGGCTAGAGTTATAGAGTATGATTCAACAGTGGAAATTGTGTTTCAAGGGACAAACTTGGTTGCTGGGATAGATCATCCTATGCATATACATGGAACTAGCTTCTACATTGTTGGACGTGGATTTGGAAATTTTGATGAATATGAGGATCCAAAGACATACAATCTAATCGACCCTCCTCTTAGGAACACAGTTCTTGTGCCTATAAATGGTTGGGCTACCATAAGGTACAGAGCTGGTAACCCAGGAGTGTGGTTTGTGCATTGCCACTTAGAACGGCACCTGACTTGGGGAATGGAAACTGTGTTCATTGTGAAGAATGGAGAAGGATGCGATGAAAGTTTACTTCCTCCACCTCCAGATCTGCCTCCTTGTTGA 1713 0.4034 MKMLLLGKKTIFLQILWSFFFVVGINSQRPREYHFVVREAKYTRLCCTKTLLTVNGRFPGPIIKAYTGETVYVNVYNKGEFNITLHWHGVKQPRNPWSDGPEYITQCPIQPGMKFRQKVIFSFEQGTLWWHAHSDWARATVHGPIFVYPRTSYPFPKPYAEVPIVFEWWKSEIKDVYEQFVISGGSPINSDALTINGQPGDFFPCSREETFKFNVDFGKTYLLRIVNAAMNVVLFFSVYKHSLTVVGADAAYTEPLTRDFICIAPGQSLDVLLHANQEPDHYYMAARAYSSSSILPFDNTTTTARIHYNGYYIPTSSPPLPCLPYYNDTNAAFDFLGSLRGKPETYPHKVPTIITTRIISTISINTFPCPEGQTFSQTCEGPNGTRLAASMNNISFELPNISILDAYYYYLNGVYSNNFPSFPPLVFNFTAEYLPMILEIPKRRTMARVIEYDSTVEIVFQGTNLVAGIDHPMHIHGTSFYIVGRGFGNFDEYEDPKTYNLIDPPLRNTVLVPINGWATIRYRAGNPGVWFVHCHLERHLTWGMETVFIVKNGEGCDESLLPPPPDLPPC* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3295 570 Gene3D - 159 323 IPR008972 -
Ahy5g3295 570 CDD CuRO_3_LCC_plant 414 553 IPR034289 GO:0005507
Ahy5g3295 570 Pfam Multicopper oxidase 164 310 IPR001117 -
Ahy5g3295 570 SUPERFAMILY Cupredoxins 374 569 IPR008972 -
Ahy5g3295 570 PANTHER MULTI-COPPER OXIDASE 37 570 IPR045087 -
Ahy5g3295 570 PANTHER LACCASE-15 37 570 - -
Ahy5g3295 570 Pfam Multicopper oxidase 443 553 IPR011706 GO:0005507|GO:0016491
Ahy5g3295 570 ProSitePatterns Multicopper oxidases signature 2. 533 544 IPR002355 GO:0005507
Ahy5g3295 570 Gene3D - 22 149 IPR008972 -
Ahy5g3295 570 SUPERFAMILY Cupredoxins 27 170 IPR008972 -
Ahy5g3295 570 CDD CuRO_1_LCC_plant 33 149 IPR034288 GO:0005507
Ahy5g3295 570 CDD CuRO_2_LCC_plant 162 308 IPR034285 -
Ahy5g3295 570 SUPERFAMILY Cupredoxins 166 340 IPR008972 -
Ahy5g3295 570 Pfam Multicopper oxidase 37 151 IPR011707 GO:0005507
Ahy5g3295 570 ProSitePatterns Multicopper oxidases signature 1. 528 548 IPR033138 -
Ahy5g3295 570 Gene3D - 373 570 IPR008972 -
Ahy5g3295 570 TIGRFAM laccase: laccase 31 570 IPR017761 GO:0046274|GO:0048046|GO:0052716
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3295 Ahy-Chr5 114991894 114994639 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3295 K05909 - gmx:100788550 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g3295 5 114991894 114994639 Ahy19g2744 19 148933333 148936056 PCT
Ahy5g3295 5 114991894 114994639 Ahy9g2852 9 117634685 117640085 PCT
Ahy19g2744 19 148933333 148936056 Ahy5g3295 5 114991894 114994639 PCT
Ahy9g2852 9 117634685 117640085 Ahy5g3295 5 114991894 114994639 PCT