Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0995 ATGAAGAGACCTTCAGCTCTGGTGGATGTGTTTCTGGTACTTGCATTGTTTAGTTGCAACTCATGGACAACGCGGAGCAGCTCAGAAAGCTGCAATCCAAATTATGTTGAGGACATTCGACCTCATAGTGTTAGTATTACTGAATTTGGAGCCGTTGGAGATGGAATCACTCTCAACACAAAAGCATTTCAGAATGCCATTTTCTACCTAAATTCTTTCGCAGACAAAGGCGGAGCAAAGCTTTTTGTCCCAGCTGGCCAATGGTTAACCGGAAGTTTTGATCTTATCAGCCACCTAACTTTGTGGTTGGACAAGGATGCAGTAATTCTTGGATCAACGAACTCTGATGATTGGCCCATTGTGGATTCCCTACCCTCATATGGTCGAGGAAGGGAGTTGCCTGGTGGAAGGCATAAAAGCCTCATTTATGGTAACAATTTGACTGATGTTATCATTACAGGTAATAATGGAACTATAGATGGTCAAGGGAGTATCTGGTGGAGCAGGTTTCGGAACAAAACATTGGACTATACACGTCCCCATTTGGTTGAATTGATGAATTCATCTGGGATTCTCATTTCAAATTTAACCTTCTTGAATTCACCATTTTGGAATATTCACCCTGTATATTGCAGCCATGTTACAGTTCAAAATGTCACAATCCATGCTCCCTCCAGTTCTCCGAATACAGATGGGATAAATCCAGATTCTTCAGATGATATATGCATTGAAGATTGTTACATAAGCACCGGCGACGATCTGGTTGCCATCAAAAGTGGTTGGGATGAATATGGAATTTCGTTTGGTCGTCCTAGTACAAACATTGTCATCCGTAGGCTCGTTGGGAAAACAACAAGCGCAGGAATCGCTATTGGAAGTGAGATGTCTGGAGGTGTTTCAGATGTTTTTGCAGAGGATATTTACATTTTTGATTCGCATACAGGGATTGGAATAAAGACTGCTCGCGGAAGGGGTGGTTATGTTCGAAATGTCTATATCTCAAAAATGACATTGGATAATGTAGATATTGCTATTAGGCTCAATGGCTTATACAAAGAACATCCTGATGATGATTACAACCCAGATGCTTTGCCTGTAATAGAAAAGATTACTATCAAGGATGTGATAGGAGAAAATATCAAACGCGCAGGCCTTATACAAGGTATAAAAGGTGACAATTTTGTCAACATTTGCCTATCAAATATCACACTTAGTGTGAGCTCAAAAACTCCATGGAACTGCTCGAACGTTGAAGGATACTCGGATTTGCTTTCGCCTGAAGCTTGTGATCCTCTCGAAGAAAGTATATTCCCGGAGCATGTTTCAGATTGTTACAATCCAGAAAATCCATTAAGGAGTTCAAGCACTAGAAATCAAGGTGCTTCCTGGTTGCTGTCTTGGTAA 1404 0.4103 MKRPSALVDVFLVLALFSCNSWTTRSSSESCNPNYVEDIRPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDDWPIVDSLPSYGRGRELPGGRHKSLIYGNNLTDVIITGNNGTIDGQGSIWWSRFRNKTLDYTRPHLVELMNSSGILISNLTFLNSPFWNIHPVYCSHVTVQNVTIHAPSSSPNTDGINPDSSDDICIEDCYISTGDDLVAIKSGWDEYGISFGRPSTNIVIRRLVGKTTSAGIAIGSEMSGGVSDVFAEDIYIFDSHTGIGIKTARGRGGYVRNVYISKMTLDNVDIAIRLNGLYKEHPDDDYNPDALPVIEKITIKDVIGENIKRAGLIQGIKGDNFVNICLSNITLSVSSKTPWNCSNVEGYSDLLSPEACDPLEESIFPEHVSDCYNPENPLRSSSTRNQGASWLLSW* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0995 467 Gene3D - 21 422 IPR012334 -
Ahy9g0995 467 SUPERFAMILY Pectin lyase-like 39 431 IPR011050 -
Ahy9g0995 467 SMART pbh1 328 349 IPR006626 -
Ahy9g0995 467 SMART pbh1 211 237 IPR006626 -
Ahy9g0995 467 SMART pbh1 238 270 IPR006626 -
Ahy9g0995 467 SMART pbh1 299 320 IPR006626 -
Ahy9g0995 467 SMART pbh1 142 195 IPR006626 -
Ahy9g0995 467 SMART pbh1 272 293 IPR006626 -
Ahy9g0995 467 Pfam Glycosyl hydrolases family 28 137 418 IPR000743 GO:0004650|GO:0005975
Ahy9g0995 467 PANTHER OS07G0245200 PROTEIN 7 452 - -
Ahy9g0995 467 PANTHER PECTIN LYASE-RELATED 7 452 - -
Ahy9g0995 467 MobiDBLite consensus disorder prediction 448 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0995 Ahy-Chr9 19566140 19570026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0995 1 467 Glycoside Hydrolase AT3G62110 67.300 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0995 - - gmx:100786985 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1262 19 25099792 25103723 Ahy9g0995 9 19566140 19570026 hybridization
Ahy16g0793 16 14206688 14210399 Ahy9g0995 9 19566140 19570026 PCT
Ahy6g0547 6 6724790 6728477 Ahy9g0995 9 19566140 19570026 PCT
Ahy9g0995 9 19566140 19570026 Ahy16g0793 16 14206688 14210399 PCT
Ahy9g0995 9 19566140 19570026 Ahy6g0547 6 6724790 6728477 PCT