Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2693 ATGGGAGAGAAAGAAAATAAATTAGAGAAAACAAGAGTAGCGGAAAAAGAGCAGCCAATAGAACCAAAAAAGGCAGAAACAATTGTAGTAGAAGATAAAGGAGTAGAAAAATTGATGGAAGAACCAAAATCCGAAGCCGCAGTTCTACCTGAAATTGTGCTAAGAGTGTTCATGCATTGTGAAGGTTGTGCCCGCAAGGTTCGTCGTTCACTGAAGGACTTTCCAGGGGTAAAAACAGTGATAACAGATACTAAGTCTCAGAAAGCAGTGGTGAAGGGAGAAATCACAGATCCACTTAAGATTGTGGAAAGAGTGCAGAAAAAGAGTCATAAGAAGGTGGAACTTCTATCTCCAATTCCAAAACAGTCTTCATCAGGGGATGAGAAAAAATCACCAATAGAAGAAGAGAAGACTAAGCAAAAGAAACAAGAGATTATAACTGTTGTTCTGAAAGTTCACATGCACTGCCAAGCTTGTTCACAAGAAATCAAGCGACGAATACTCAAAATGAAGGGAGTGGAATCAGCTGAAGCAAATCTAAAGAATTCATTAGTTAGTGTAAAAGGCGCCATTGACGCTTCGAAGCTTGTTGACTACGTGTACAAGAGAACAGCAAGATATGCAGTAATAATAAAGGTAGAACCACAGAAAACATCAAAGATTCAAGAAGAGAAACCAACAAATTCAGAAGAAGAAAGAGCAAAATTAAAGGAAGAAGAAAAGTCACAACAAGAACAAGTTGATAGCACTGAAAATAACAAGAAAGAAGAAGAAAAGAAGAATAAAAAAGAAGAGAAAGTAGCTGAAGAACAAATAAAACAAGAAGAGAAAGAAAAAGAGGATAATAATAATAATAATAATAATAATAATAGTAGCAAAGAAAAAGAGATTAGTTTGACTAAAAATGAATATTACTATTACCCACCAAGACATGAAATGGAGTTGTATGCATATGCCTACAATTATAATCTTCCACCACCTCCACCTATTTCTCTTCTTAATAATGCACACCCTCTTTATTATCAAAACTATCCTCCTCAGATGTTTAGTGATGAAAATCCAGATACATGTAATGTTATGTAA 1083 0.3509 MGEKENKLEKTRVAEKEQPIEPKKAETIVVEDKGVEKLMEEPKSEAAVLPEIVLRVFMHCEGCARKVRRSLKDFPGVKTVITDTKSQKAVVKGEITDPLKIVERVQKKSHKKVELLSPIPKQSSSGDEKKSPIEEEKTKQKKQEIITVVLKVHMHCQACSQEIKRRILKMKGVESAEANLKNSLVSVKGAIDASKLVDYVYKRTARYAVIIKVEPQKTSKIQEEKPTNSEEERAKLKEEEKSQQEQVDSTENNKKEEEKKNKKEEKVAEEQIKQEEKEKEDNNNNNNNNNSSKEKEISLTKNEYYYYPPRHEMELYAYAYNYNLPPPPPISLLNNAHPLYYQNYPPQMFSDENPDTCNVM* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2693 360 SUPERFAMILY HMA, heavy metal-associated domain 54 109 IPR036163 GO:0046872
Ahy8g2693 360 ProSiteProfiles Heavy-metal-associated domain profile. 58 114 IPR006121 GO:0046872
Ahy8g2693 360 MobiDBLite consensus disorder prediction 112 138 - -
Ahy8g2693 360 Gene3D - 49 113 - -
Ahy8g2693 360 Gene3D - 142 211 - -
Ahy8g2693 360 SUPERFAMILY HMA, heavy metal-associated domain 147 202 IPR036163 GO:0046872
Ahy8g2693 360 Coils Coil 233 289 - -
Ahy8g2693 360 MobiDBLite consensus disorder prediction 218 283 - -
Ahy8g2693 360 CDD HMA 58 114 IPR006121 GO:0046872
Ahy8g2693 360 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 360 IPR044577 GO:0046872
Ahy8g2693 360 Pfam Heavy-metal-associated domain 150 197 IPR006121 GO:0046872
Ahy8g2693 360 Pfam Heavy-metal-associated domain 53 109 IPR006121 GO:0046872
Ahy8g2693 360 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 360 - -
Ahy8g2693 360 CDD HMA 149 198 IPR006121 GO:0046872
Ahy8g2693 360 ProSiteProfiles Heavy-metal-associated domain profile. 154 200 IPR006121 GO:0046872
Ahy8g2693 360 MobiDBLite consensus disorder prediction 218 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2693 Ahy-Chr8 50387556 50389283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2693 - - adu:107463469 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2939 18 134422148 134423970 Ahy8g2693 8 50387556 50389283 hybridization
Ahy13g2899 13 116422578 116424283 Ahy8g2693 8 50387556 50389283 PCT
Ahy3g2557 3 113851805 113853519 Ahy8g2693 8 50387556 50389283 PCT
Ahy8g2693 8 50387556 50389283 Ahy13g2899 13 116422578 116424283 PCT
Ahy8g2693 8 50387556 50389283 Ahy3g2557 3 113851805 113853519 PCT