Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2899 ATGGGCGAGGAAGTGAAGAAGGTCGAGGAGACTAAAGCAGAGGAACCAAAGAAGGAAGAAGGGGAGAAGAAGCCTGAGGAATCCAAGGATGGGAAGGTAGTTGAGGAAGCTGCAGCCCCAGCAGCGCCCCCAGAGATTGTGCTTAAGGTGTTCATGCATTGCGAGGGTTGTGCACGCAAGGTTCGTCGCTCCCTTAGAGGATTCCCAGGGGTTGAGGATGTGATAACAGATTGTAAGAGTCACAAGGTGGTGGTTAAAGGAGAGAAAGCTGATCCTCTCAAGGTTAGGGAGAGAGTCCAGAGGAAGAGCCACAGACAAGTTGAGCTTCTCTCTCCCATTCCAGTTCCAGAACCAGAGGCGCCAAAAGAAGACAAGAAACCCGAAGAGCAAGAGGATCCTAAGCCCGAGGAGAAGAAAAAAGAGCCTGAGGTCATCAGAGTAGTTCTGCAAGCTCACATGCATTGTGAAGCATGTGCGCAGGAAATCAAGAGACGCATTGAGAGAATGAAGGGAGTTGAGTCAGCAGAACCGGATCTGAAGAACTCGCAAGTGAGCGTGAAGGGGGTGTTTGAAGTTGCAAACTTAGTGGACTACGTTTACAAGAGGACCGGGAAGCAAGTAGTGGTAGTGAAGCAAGAAACTGTAGAGAATAAAGAAGAATCCAATAAAGATGGTGGCAAAGAAGAGAAGAAGGGTGAGGAAGGTGATGGCGACAAAGACAAGAAGGAAGGCAGTCAAGTAGAAGAGAACAAAGAGAAGAAAGGAGAAGAAGCAGCAGCAGCAGCAGCTGAAGGAGGGACAGAAGAGAGCAACAAGGTGGTTGAACTGAAGAAGAATGAATATTACTACATGCCACCAAGGTATGGCTATGGTGGTGGCAACATGGAATACTATGCAGCTTATCCTGGTCCAGGTTACCCTCCTCAGATCTTCAGTGATGAGAACCCCAATGCATGTACTGTGATGTAA 969 0.484 MGEEVKKVEETKAEEPKKEEGEKKPEESKDGKVVEEAAAPAAPPEIVLKVFMHCEGCARKVRRSLRGFPGVEDVITDCKSHKVVVKGEKADPLKVRERVQRKSHRQVELLSPIPVPEPEAPKEDKKPEEQEDPKPEEKKKEPEVIRVVLQAHMHCEACAQEIKRRIERMKGVESAEPDLKNSQVSVKGVFEVANLVDYVYKRTGKQVVVVKQETVENKEESNKDGGKEEKKGEEGDGDKDKKEGSQVEENKEKKGEEAAAAAAEGGTEESNKVVELKKNEYYYMPPRYGYGGGNMEYYAAYPGPGYPPQIFSDENPNACTVM* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2899 322 Coils Coil 322 322 - -
Ahy13g2899 322 CDD HMA 151 207 IPR006121 GO:0046872
Ahy13g2899 322 MobiDBLite consensus disorder prediction 215 259 - -
Ahy13g2899 322 ProSiteProfiles Heavy-metal-associated domain profile. 153 186 IPR006121 GO:0046872
Ahy13g2899 322 ProSiteProfiles Heavy-metal-associated domain profile. 52 108 IPR006121 GO:0046872
Ahy13g2899 322 MobiDBLite consensus disorder prediction 99 142 - -
Ahy13g2899 322 MobiDBLite consensus disorder prediction 215 271 - -
Ahy13g2899 322 SUPERFAMILY HMA, heavy metal-associated domain 47 102 IPR036163 GO:0046872
Ahy13g2899 322 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 322 - -
Ahy13g2899 322 Gene3D - 142 209 - -
Ahy13g2899 322 Pfam Heavy-metal-associated domain 152 193 IPR006121 GO:0046872
Ahy13g2899 322 Pfam Heavy-metal-associated domain 48 101 IPR006121 GO:0046872
Ahy13g2899 322 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 322 IPR044577 GO:0046872
Ahy13g2899 322 SUPERFAMILY HMA, heavy metal-associated domain 148 208 IPR036163 GO:0046872
Ahy13g2899 322 MobiDBLite consensus disorder prediction 1 44 - -
Ahy13g2899 322 Gene3D - 41 116 - -
Ahy13g2899 322 MobiDBLite consensus disorder prediction 1 34 - -
Ahy13g2899 322 MobiDBLite consensus disorder prediction 118 142 - -
Ahy13g2899 322 CDD HMA 52 108 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2899 Ahy-Chr13 116422578 116424283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2899 - - adu:107480020 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2899 13 116422578 116424283 Ahy3g2557 3 113851805 113853519 hybridization
Ahy13g2899 13 116422578 116424283 Ahy18g2939 18 134422148 134423970 PCT
Ahy13g2899 13 116422578 116424283 Ahy8g2693 8 50387556 50389283 PCT
Ahy18g2939 18 134422148 134423970 Ahy13g2899 13 116422578 116424283 PCT
Ahy8g2693 8 50387556 50389283 Ahy13g2899 13 116422578 116424283 PCT