Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2939 ATGGGAGAGGAAGAAAATAAACTAGAGAAAACAAAAGCAGCGGAAAAAGAGCAGCCAAAAGAACCAAAAAAGGCAGAAACAACTGTAGTAGAAGATAAAGGAGTAGAAAAATTGGTGGAAGAACCAAAATCCGAAGCCGCAGTTCTACCTGAAATTGTGCTAAGAGTGTTCATGCATTGTGAAGGTTGTGCCCGCAAGGTTCGTCGTTCACTGAAGGACTTTCCAGGGATAGAAACAGTGATAACAGATACTAAGTCTCAGAAAGCAGTGGTGAAGGGAGAAATAGCAGATCCACTTAAGATTGTGGAGAGAGTGCAGAAAAAGAGTCATAGAAAGGTGGAACTTCTGTCTCCAATTCCAAAACAGTCTTCATCAGAGGATGAGAAAAAATCACCAATAGAAGAAGAGAAGACCGAGCAAAAGAAACAAGAGATTATAACTGTTGTTCTGAAAGTTCACATGCACTGCGAAGCCTGTTCACAAGAAATCAAGCGACGAATACTCAAAATGAAGGGGGTGGAATCAGCTGAAGCAGATCTAAAGAATTCATTAGTCAGTGTAAAAGGCGCCATGGAAGCTTCGAAGCTTGTTGACTACGTATACAAGAGAACAGCAAGACATGCAGTGATAATAAGAGTAGAACCACAGGAAACATCAAAGATTCAAGAAGAAAAACCAACAAATTCAGAAGAAGAAAAGTCACAACAAGAACAAGTTGGTAGCACTGAAAATAACAAGAAAGAAGAAGAAAAGAAGAATAAAAAAGAAGAGAAAGTAGCTGAAGAAGAAATAAAACAAGAAGAGAAAGAAAAAAAGGAGGATAATAATAATAATAATAATAATAATAATAATAAAGAAAAAGAGACTATTAGTTTGACTAAAAATGAACATTACTATTACCCACCAAGACATGGCATGGAGTTGTATGCATATGCCTACAATTATAATTTTCCACCACCTCCACCTCCACCTCTTTCTCTTCTTAATAATGCACACCCTCTTTATTATCAAAACTATCCTCCTCAGATGTTCAATGATGAAAATCCAGATGCATGTAATGTTATGTAA 1068 0.368 MGEEENKLEKTKAAEKEQPKEPKKAETTVVEDKGVEKLVEEPKSEAAVLPEIVLRVFMHCEGCARKVRRSLKDFPGIETVITDTKSQKAVVKGEIADPLKIVERVQKKSHRKVELLSPIPKQSSSEDEKKSPIEEEKTEQKKQEIITVVLKVHMHCEACSQEIKRRILKMKGVESAEADLKNSLVSVKGAMEASKLVDYVYKRTARHAVIIRVEPQETSKIQEEKPTNSEEEKSQQEQVGSTENNKKEEEKKNKKEEKVAEEEIKQEEKEKKEDNNNNNNNNNNKEKETISLTKNEHYYYPPRHGMELYAYAYNYNFPPPPPPPLSLLNNAHPLYYQNYPPQMFNDENPDACNVM* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2939 355 MobiDBLite consensus disorder prediction 242 276 - -
Ahy18g2939 355 CDD HMA 149 189 IPR006121 GO:0046872
Ahy18g2939 355 MobiDBLite consensus disorder prediction 218 232 - -
Ahy18g2939 355 MobiDBLite consensus disorder prediction 112 138 - -
Ahy18g2939 355 ProSiteProfiles Heavy-metal-associated domain profile. 58 114 IPR006121 GO:0046872
Ahy18g2939 355 MobiDBLite consensus disorder prediction 1 28 - -
Ahy18g2939 355 Pfam Heavy-metal-associated domain 53 108 IPR006121 GO:0046872
Ahy18g2939 355 Pfam Heavy-metal-associated domain 150 197 IPR006121 GO:0046872
Ahy18g2939 355 Gene3D - 142 211 - -
Ahy18g2939 355 CDD HMA 58 114 IPR006121 GO:0046872
Ahy18g2939 355 Coils Coil 232 289 - -
Ahy18g2939 355 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 355 IPR044577 GO:0046872
Ahy18g2939 355 MobiDBLite consensus disorder prediction 218 290 - -
Ahy18g2939 355 SUPERFAMILY HMA, heavy metal-associated domain 54 108 IPR036163 GO:0046872
Ahy18g2939 355 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 355 - -
Ahy18g2939 355 SUPERFAMILY HMA, heavy metal-associated domain 147 202 IPR036163 GO:0046872
Ahy18g2939 355 Gene3D - 46 122 - -
Ahy18g2939 355 MobiDBLite consensus disorder prediction 123 138 - -
Ahy18g2939 355 ProSiteProfiles Heavy-metal-associated domain profile. 154 187 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2939 Ahy-Chr18 134422148 134423970 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2939 - - adu:107463469 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2939 18 134422148 134423970 Ahy18g2939 18 134422148 134423970 ECH
Ahy18g2939 18 134422148 134423970 Ahy8g2693 8 50387556 50389283 hybridization
Ahy13g2899 13 116422578 116424283 Ahy18g2939 18 134422148 134423970 PCT
Ahy3g2557 3 113851805 113853519 Ahy18g2939 18 134422148 134423970 PCT
Ahy18g2939 18 134422148 134423970 Ahy13g2899 13 116422578 116424283 PCT
Ahy18g2939 18 134422148 134423970 Ahy3g2557 3 113851805 113853519 PCT