Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1608 ATGGGTTCCTACGACAACAATCCCTTTGCGGACGATGATGTTAACCCCTTCGCCGATGGAGCTAAAGGAAAAGCTTCTGGTGGACGATCACAATTTGGGGCAGGCTCATTCTTTTCCACTAGTTCATCATCAAAGTTATCGCCCCTTCCTCATGAGCCTTATGATCGTAGTGCAACGGTTGACATTCCTCTTGACTCAACTAAGGACCTCAAAGCAAGGGAGAAAGAACTTGAAGCTAGAGAGGCTGAATTGAAAAAAAGGGAACAGGAACTGAAACGAAAGGAAGATGCTATAGCACGAGCTGGAATAGTGATAGAGGAAAAGAATTGGCCACCATTATTCCCTATCATTCATCATGACATTGCAGCCGAAATACCAATACATCTTCAAAGGATCCAGTATGTTGCATTCACAACATGGTTGGGAGTGATAACGTGTCTTACATGGAATTTGGTAGCAGTTAGTGTGGCTTGGGCGTATGGAGGAGCTATGTCAAACTGGTTTCTTGCTGTCATATACCTTATTTCGGGAGTTCCAGGATCCTTTACATTGTGGTATCGCCCTCTTTATCGTGCTAGCAGGACGGACAGTGCTCTCAAGTTTGGTTGGTTTTTCCTGTGTTACTCGGTGCACTGTTTCTTTTGCGCTTATGCTGCAATTGCGCCTCCGTTTTTCTTCAATGGAGAATCCCTAACGGGTATACTACCTGCGCTTGAGGAGTTAACCTCTAATTCACTTGTTGCGGGATTCTACTTTGCTGGTTTTGCATGTTTTGCCATTGAAACAATGCTAAGCTTATGGGTTATTCAGCAAGTATACCATTATTTCCGGGGGACTGGGAAGGCCACGGAGTTAAGAAAAGCGGCTGCCAGAGAGACCATGATGGCAGCTCTATAA 897 0.4493 MGSYDNNPFADDDVNPFADGAKGKASGGRSQFGAGSFFSTSSSSKLSPLPHEPYDRSATVDIPLDSTKDLKAREKELEAREAELKKREQELKRKEDAIARAGIVIEEKNWPPLFPIIHHDIAAEIPIHLQRIQYVAFTTWLGVITCLTWNLVAVSVAWAYGGAMSNWFLAVIYLISGVPGSFTLWYRPLYRASRTDSALKFGWFFLCYSVHCFFCAYAAIAPPFFFNGESLTGILPALEELTSNSLVAGFYFAGFACFAIETMLSLWVIQQVYHYFRGTGKATELRKAAARETMMAAL* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1608 298 Coils Coil 67 97 - -
Ahy8g1608 298 MobiDBLite consensus disorder prediction 32 48 - -
Ahy8g1608 298 MobiDBLite consensus disorder prediction 1 62 - -
Ahy8g1608 298 Pfam SCAMP family 107 279 IPR007273 GO:0015031|GO:0016021
Ahy8g1608 298 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 298 IPR007273 GO:0015031|GO:0016021
Ahy8g1608 298 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 1 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1608 Ahy-Chr8 33209487 33212793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1608 60 298 Miscellaneous Gene Families AT2G20840 68.201 9.32e-120 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1608 K19995 - jre:108981942 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0845 18 10095422 10098904 Ahy8g1608 8 33209487 33212793 hybridization
Ahy8g1608 8 33209487 33212793 Ahy13g1515 13 21156920 21164353 PCT
Ahy13g1515 13 21156920 21164353 Ahy8g1608 8 33209487 33212793 PCT