Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1515 ATGAGCCGTTACGATCCCAATCCCTTCGAGGAAGACGAAGTTAATCCGTTTGCGAACCCTGGAAGTGTTCCTGCAGCAACCTCAGTGCTCTCACCACTTCCTCCTGAGCCATATGATCGTGGGGCAACTGTTGAAATTCCTCTTGATAGCTCAAACTCAAAGGACATTAAAGCGAAAGAGAAGGAACTTAAAGCTCGAGAGGCTGATTTGAAAAGAAGGGAGCAGGAAATAAAACGAAGGGAAGACGCTATATCACGCGCTGGGATAGTTATAGAGGAAAAAAATTGGCCACCATTTTTCCCCATCATTCATCATGACATTGCAAATGAAATACCAATACATCTTCAAAGGACCCAGTATCTTGCATTTTCAACGTGGTTAGGTTTGGTTTTGTGTCTTACATGGAATATTGTGGCAGTAACTACTGCTTGGATCAAAGGAGAGGGTCCAACGATCTGGTTTCTCGCTATCATCTACTTCATATCTGGGGTTCCAGGATCCTATGTACTGTGGTATCGCCCTCTTTATCGTGCAATGAGGACTGACAGTGCTCTGAAATTTGGCTGGTTTTTCTTGTGTTACCTGATTCACATCGGCTTTTGCATTTTTGCAGCAGTAGCTCCACCAATTATCTTCAAAGGAAAATCTCTCACAGGGATTTTGCCTGCAATAGATGTTTTGGGCGACAATGCACTGGTTGGGATATTCTACTTTATTGGGTTTGGATTTTTCTGTCTGGAGTCGCTGCTCAGCGTCTGGGTTATTCAGCAAGTATACATGTACTTCCGTGGAAGCGGCAAGGCTGCAGAGATGAAGCGTGATGCTGCTAGAGGGACCATGATGGCAGCACTATGA 855 0.4468 MSRYDPNPFEEDEVNPFANPGSVPAATSVLSPLPPEPYDRGATVEIPLDSSNSKDIKAKEKELKAREADLKRREQEIKRREDAISRAGIVIEEKNWPPFFPIIHHDIANEIPIHLQRTQYLAFSTWLGLVLCLTWNIVAVTTAWIKGEGPTIWFLAIIYFISGVPGSYVLWYRPLYRAMRTDSALKFGWFFLCYLIHIGFCIFAAVAPPIIFKGKSLTGILPAIDVLGDNALVGIFYFIGFGFFCLESLLSVWVIQQVYMYFRGSGKAAEMKRDAARGTMMAAL* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1515 284 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 19 284 IPR007273 GO:0015031|GO:0016021
Ahy13g1515 284 Pfam SCAMP family 93 264 IPR007273 GO:0015031|GO:0016021
Ahy13g1515 284 MobiDBLite consensus disorder prediction 1 52 - -
Ahy13g1515 284 Coils Coil 53 80 - -
Ahy13g1515 284 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 19 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1515 Ahy-Chr13 21156920 21164353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1515 2 284 Miscellaneous Gene Families AT1G11180 73.010 2.43e-152 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1515 K19995 - jre:109022292 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0845 18 10095422 10098904 Ahy13g1515 13 21156920 21164353 PCT
Ahy8g1608 8 33209487 33212793 Ahy13g1515 13 21156920 21164353 PCT
Ahy13g1515 13 21156920 21164353 Ahy18g0845 18 10095422 10098904 PCT
Ahy13g1515 13 21156920 21164353 Ahy8g1608 8 33209487 33212793 PCT