Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0845 ATGGGTTCCTACGACAACAATCCCTTTGCGGACGATGATGTTAACCCCTTCGCCGATGGAGCTAAAGGAAAAGCTTCTGGTGGACGATCACAATTTGGGGCAGGCTCATTCTTTTCCACTAGTTCATCATCAAAGTTATCGCCCCTTCCTCATGAGCCTTATGATCGTAGTGCAACGGTTGACATTCCTCTTGACTCAACTAAGGACCTCAAAGCAAGGGAGAAGGAACTTGAAGCTAGAGAGGCTGAATTGAAAAAAAGGGAACAGGAACTGAAACGAAAGGAAGATGCTATAGCACGAGCTGGAATAGTGATAGAGGAAAAGAATTGGCCACCATTATTCCCTATCATTCATCATGACATTGCAGCCGAAATACCAATACATCTTCAAAGGATCCAGTATGTTGCATTCACAACATGGTTGGGAGTGATAACGTGTCTTATATGGAATTTGGTAGCAGTTAGTGTGGCTTGGGCATATGGAGGAGCTATGTCAAACTGGTTTCTTGCTGTCATATACCTTATTTCGGGAGTTCCAGGATCCTTTACATTATGGTATCGCCCTCTTTATCGTGCTAGCAGGACGGACAGTGCTCTCAAGTTTGGTTGGTTTTTCCTGTGTTACTCGGTGCACTGTTTCTTTTGCGCTTATGCTGCAATTGCGCCTCCGTTTTTCTTCAATGGAGAATCCCTAACGGGTATACTACCTGCGCTTGAGGAGTTAACCTCTAATTCACTTGTTGCGGGATTCTACTTTGCTGGTTTTGCATGTTTCGCCATTGAAACAATGCTAAGCTTATGGGTTATTCAGCAAGTATACCATTATTTCCGGGGGACTGGGAAGGCCACGGAGTTAAGAAAAGCCGCTGCCAGAGAGACCATGATGGCAGCTCTATAA 897 0.4482 MGSYDNNPFADDDVNPFADGAKGKASGGRSQFGAGSFFSTSSSSKLSPLPHEPYDRSATVDIPLDSTKDLKAREKELEAREAELKKREQELKRKEDAIARAGIVIEEKNWPPLFPIIHHDIAAEIPIHLQRIQYVAFTTWLGVITCLIWNLVAVSVAWAYGGAMSNWFLAVIYLISGVPGSFTLWYRPLYRASRTDSALKFGWFFLCYSVHCFFCAYAAIAPPFFFNGESLTGILPALEELTSNSLVAGFYFAGFACFAIETMLSLWVIQQVYHYFRGTGKATELRKAAARETMMAAL* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0845 298 Pfam SCAMP family 107 279 IPR007273 GO:0015031|GO:0016021
Ahy18g0845 298 Coils Coil 67 97 - -
Ahy18g0845 298 MobiDBLite consensus disorder prediction 32 48 - -
Ahy18g0845 298 MobiDBLite consensus disorder prediction 1 62 - -
Ahy18g0845 298 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 1 298 - -
Ahy18g0845 298 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 298 IPR007273 GO:0015031|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0845 Ahy-Chr18 10095422 10098904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0845 60 298 Miscellaneous Gene Families AT2G20840 68.201 4.43e-120 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0845 K19995 - jre:108981942 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0845 18 10095422 10098904 Ahy18g0845 18 10095422 10098904 ECH
Ahy18g0845 18 10095422 10098904 Ahy8g1608 8 33209487 33212793 hybridization
Ahy18g0845 18 10095422 10098904 Ahy13g1515 13 21156920 21164353 PCT
Ahy13g1515 13 21156920 21164353 Ahy18g0845 18 10095422 10098904 PCT