Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1555 ATGGCAAGTGAGTTGATATCTGTGCCCTACGCCCTATCAACCACACAAAGAGTAGTAGTAGCAAAACATAGGAACCACTTTGGACGCAAAACAGTTACTCATGCCACTGCAAAAATTCATGTCATCTGTGGTTATTCCACCAAAGAGGAGGATGCCCAGTTAATTGGGAGGCGTTCAGCTAATTACCAGCCCAATCTATGGACTTATGAATTTCTTCATCAGTCTCACCACAATCATCACGTGGTTGATAAAGTTGAAGAGAGAGCAAGAAAGTTAGAAGAGAAGGTGCGATACAGGATGATGAATAGTTCAGACATGGAGCCACTGAACTTGCTTGAACTCATTGACGATCTTCACCGGTTGGGCCTCTCTTACAAGTTCCAAAACCACATCAACTCTGCTCTTTCCCGCATTCATTCTTCACAATATATGCACCTTCACACGCACAAAACTCTACATGCTACTGCTATCCTCTTCAGAATTCTTAGACAACATGCTTTTCACGTCTCTCAAGATGTATTTGAGAGTTTTACGGATGATGAGAAAAACTTTAAGCCTGAAATTGGCAATGATGTGCAAGGAATGCTAAGTTTGTACGAGGCATCACACCTTAGCTTTGAGAAAGAAAATTTATGTGAGAAGGCAAAGACAATTTCAGCAACAAATTTGATGAACATAATATCAAAAGATGAGACAGAGAATAAAGTAAAAGAAAGCACTAGGAGTGTGTTGGAGGGTCTTCCGTACCACCATAGTCCTTACAGAGTAGAGGCACGACGCTATATTGACACATACCATAAAAAGGAACCACATAATCAGTTGCTATTAGAGCTTGCCAAGCTTGATTTCAACATGGTTCAGTCATTATATCAACAAGAGCTTCAACAAATGAAAAGGTGGTGGAGGGACATGGGGCTGGCTATCAAGCTGAGCTTTGCCCGGGATAGGTTAATGGAATCTTTCTTTTGGTCACTGGGAATAGTCTCACATCCAAATTTGTCTTATTGTCGTAAAGAACTTACTAAGGTGGCAACTTTAGTTACCGTTCTTGATGATGTCTACGATGTCTATGGTACTTTGGATGAACTGGAGCTCTTCACGGATGCTGTTGAGAGATGGGATGTAAATGCTATTAATAATCTTCCAGACTACATGATATTGTGCTTCCTAGCGCTTTACAACACTATCAATGAAATGGCTTTTGATATCTTCAAAGATTATGCAGTCAAGTGTCTTCCCTATCTCAAAAAAGCTTGGTGTGATTTGTGCAAATCGTTTCTGCAAGAAGCAAAATGGTCCAACAACAAAGTTGTACCAAGATTGAAGGAGTACTTAGAAAATGGTTCAGTCTCATGCTCAGGCGGGGTTTTTCTTACTCACTCCTTCTTCTTACTCAATCAAGAAATAACAGAGCCAGCACTTCATTCGTTAATTAACTACCACGATCTCTTGCGCTCTTCATCCACCGTTTTCAGGATTAGCAACGATTTGGCCACCTCAACGGATGAGATGGAGTGCGGCGAAACCGCGAATTCAATAACGTGCTATATGAATGAAACGGGTGGCTCCGAAGAGGATGCACGAAGGAACTTGAGAAGTCTTATTGACGAAGCATGGAAGAATATGAACAGATGCCTTGTGATGGATTCTACATTCGACAAATCCTTCATAGAAGTAGCCATGAACCTTGCCCGTATTGCCCAATTCACATACCAACATGGAGATGGACATGGACGACCAGACAACAGATCAAAGACCAGAATAAAGTCCTTGCTTGTTGATCCAATTCCTGTGAATGTGCCAACATGA 1809 0.414 MASELISVPYALSTTQRVVVAKHRNHFGRKTVTHATAKIHVICGYSTKEEDAQLIGRRSANYQPNLWTYEFLHQSHHNHHVVDKVEERARKLEEKVRYRMMNSSDMEPLNLLELIDDLHRLGLSYKFQNHINSALSRIHSSQYMHLHTHKTLHATAILFRILRQHAFHVSQDVFESFTDDEKNFKPEIGNDVQGMLSLYEASHLSFEKENLCEKAKTISATNLMNIISKDETENKVKESTRSVLEGLPYHHSPYRVEARRYIDTYHKKEPHNQLLLELAKLDFNMVQSLYQQELQQMKRWWRDMGLAIKLSFARDRLMESFFWSLGIVSHPNLSYCRKELTKVATLVTVLDDVYDVYGTLDELELFTDAVERWDVNAINNLPDYMILCFLALYNTINEMAFDIFKDYAVKCLPYLKKAWCDLCKSFLQEAKWSNNKVVPRLKEYLENGSVSCSGGVFLTHSFFLLNQEITEPALHSLINYHDLLRSSSTVFRISNDLATSTDEMECGETANSITCYMNETGGSEEDARRNLRSLIDEAWKNMNRCLVMDSTFDKSFIEVAMNLARIAQFTYQHGDGHGRPDNRSKTRIKSLLVDPIPVNVPT* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1555 602 Pfam Terpene synthase family, metal binding domain 276 540 IPR005630 GO:0000287|GO:0010333|GO:0016829
Ahy8g1555 602 PANTHER TERPENE SYNTHASE 12-RELATED 50 597 - -
Ahy8g1555 602 Gene3D - 106 271 IPR036965 GO:0010333|GO:0016829
Ahy8g1555 602 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 63 270 IPR008930 -
Ahy8g1555 602 Pfam Terpene synthase, N-terminal domain 67 233 IPR001906 GO:0010333|GO:0016829
Ahy8g1555 602 SFLD Terpene Cyclase Like 1 C Terminal Domain 271 597 IPR034741 -
Ahy8g1555 602 PANTHER OS04G0344100 PROTEIN-RELATED 50 597 - -
Ahy8g1555 602 SUPERFAMILY Terpenoid synthases 271 596 IPR008949 -
Ahy8g1555 602 Gene3D Farnesyl Diphosphate Synthase 64 586 IPR008949 -
Ahy8g1555 602 CDD Terpene_cyclase_plant_C1 57 595 IPR044814 GO:0010333|GO:0016102
Ahy8g1555 602 SFLD Isoprenoid Synthase Type I 271 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1555 Ahy-Chr8 32360596 32364893 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1555 K12742 - gmx:100786684 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0776 18 8757898 8762163 Ahy8g1555 8 32360596 32364893 hybridization
Ahy8g1555 8 32360596 32364893 Ahy13g1448 13 18730971 18736067 PCT