Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1448 ATGTTACTCAATTCTTCTTCCTCCATTATTTCAAATGTTCATCTTGCCAAACATAACGAACTAGTGGAACCTCTTATTAGTAATCATAGAATTATTAACAGTTCTCGGATCCGATGCGTGGCAACAACCACAGCCGTTGTTCCTCCAAGAAAATCAGCAAATTACCAGCCTAACCTCTGGACTTTCGACTTTTTACAGTCCTTAAAGCATGATTATTCGGATTCGATATACGAAGATTTAAATGGGAATCTAAAAGAGAAAGTTAGGAGAATGATAAAGCAGAAGGAAGATAATGGAGAGATATGGCATAAACTGGATCTAGTTAATGATGTGAAGAGGTTGGGTCTGAGTTACCACTTTGAGAAGGAAATAGAAGAAACACTTGATAGGTTTGCGTCTAATAGAGCCAAATTTGTGAATACGAATAACCTGCACCAAGCCGCTTTAAGCTTCAGCCTCCTAAGAGAATATGGCTATCATGTCTCACCAGATGTTTTTGAGAAGTTCAAGGACAAGAAGAATAACTTCAAGAAAGGCCTTACCAAAGACGTGAAAGGGATGCTGAGTCTATACGAGGCATCATTTCTTGGTTATGAAGGAGAAATAATCTTGGATGAGGCAAAATCATTCACAACCTTCCATCTTAAGAACTCAATCATCAATGATGAGAATAATGTCCTCTTAGAACAAGTGAAGCATGCATTGGAACTTCCATTGCATCATAGAATCCAAAGACTTGAAGCCAGATGGTACATTGAGGCTTATGAAAAAAGAAGAGACTCAAATAGGATATTACTTGAAGCAGCTAAATTAGATTTTAACGTTGTTCAATCAACACTTCAAAAAGACCTTCAAGAAATCTCAAGATGGTGGAAGCAAGTGGGAGTAGCCTCAAAGTTAAGCTTCAGCAGAGACAGGTTAATGGAGTGTTTCTTTTGGACCGTTGGAATGGCCTTTGAGCCTCATTTCAGTGATCTCCGTAAAGGATTAACCAAAGTCACTTCCTTCATTACAATAATCGATGATGTCTATGATGTTTATGGGACCTTGGATGAGCTTGAGCTTTTCACCGCAGCTGTAGAAAGTTGGGACATTAAAGCAGTTCAAGTTCTACCAGATTACATGAGGATTTGCTTTCTAGCACTCTTCAACACTGTTAACGAATTGGCCTATGATGTCCTTTACAAGCAAGGACTTGACATCCTTCCCTACCTCACCAGAACATGGTCAGATATGTTGAAAGCATTCCTAATAGAAGCCAAGTGGTGCAAGGAGAAAAATATACCAAAATTTGAGGAGTACCTCAATAATGCTTGGGTGTCAGTGTCTGGTGTTGTTATATTAACGCATGCCTATTTCTTATTGAATCACAACATCACTAAAGAAGCACTTGATTCCTTGCATAATTATCATGGCCTATTGCGTGGACCATCTACTATTTTTCGACTTTGCAATGATTTGGGAACCTCTAAGGCTGAGCTACAAAGAGGTGAAGCAGCAAGCTCTATTATATGCTACATGAGGGAAAATGGTGCAAGTGAGGAATGTGCACACAAATACATAAACAATGTGCTAGATGAGACATGGAAGAAAATGAACAAAGATAGGGTCACCAATTCTCCATTCTCTAAATCTTTCATTGAAACAGCAATGAACCTTGGTAGGATTTCTCAGTGCACGTATCAATATGGAGATGCCCATGGAGCACCTGATGCATCAGCAAAGAATCGAATTCGTTCTTTGATAATTGAACCTGTTTCTCTATGA 1767 0.3888 MLLNSSSSIISNVHLAKHNELVEPLISNHRIINSSRIRCVATTTAVVPPRKSANYQPNLWTFDFLQSLKHDYSDSIYEDLNGNLKEKVRRMIKQKEDNGEIWHKLDLVNDVKRLGLSYHFEKEIEETLDRFASNRAKFVNTNNLHQAALSFSLLREYGYHVSPDVFEKFKDKKNNFKKGLTKDVKGMLSLYEASFLGYEGEIILDEAKSFTTFHLKNSIINDENNVLLEQVKHALELPLHHRIQRLEARWYIEAYEKRRDSNRILLEAAKLDFNVVQSTLQKDLQEISRWWKQVGVASKLSFSRDRLMECFFWTVGMAFEPHFSDLRKGLTKVTSFITIIDDVYDVYGTLDELELFTAAVESWDIKAVQVLPDYMRICFLALFNTVNELAYDVLYKQGLDILPYLTRTWSDMLKAFLIEAKWCKEKNIPKFEEYLNNAWVSVSGVVILTHAYFLLNHNITKEALDSLHNYHGLLRGPSTIFRLCNDLGTSKAELQRGEAASSIICYMRENGASEECAHKYINNVLDETWKKMNKDRVTNSPFSKSFIETAMNLGRISQCTYQYGDAHGAPDASAKNRIRSLIIEPVSL* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1448 588 SUPERFAMILY Terpenoid synthases 262 586 IPR008949 -
Ahy13g1448 588 Coils Coil 77 97 - -
Ahy13g1448 588 SFLD Terpene Cyclase Like 1 C Terminal Domain - Enzymatic 261 587 - -
Ahy13g1448 588 Pfam Terpene synthase family, metal binding domain 266 531 IPR005630 GO:0000287|GO:0010333|GO:0016829
Ahy13g1448 588 Gene3D - 97 261 IPR036965 GO:0010333|GO:0016829
Ahy13g1448 588 PANTHER TERPENE SYNTHASE 12-RELATED 38 587 - -
Ahy13g1448 588 Gene3D Farnesyl Diphosphate Synthase 57 576 IPR008949 -
Ahy13g1448 588 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 56 260 IPR008930 -
Ahy13g1448 588 Pfam Terpene synthase, N-terminal domain 60 235 IPR001906 GO:0010333|GO:0016829
Ahy13g1448 588 SFLD Terpene Cyclase Like 1 C Terminal Domain 261 587 IPR034741 -
Ahy13g1448 588 PANTHER OS04G0344100 PROTEIN-RELATED 38 587 - -
Ahy13g1448 588 CDD Terpene_cyclase_plant_C1 50 585 IPR044814 GO:0010333|GO:0016102
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1448 Ahy-Chr13 18730971 18736067 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1448 K12742 K19968 gmx:100782452 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0776 18 8757898 8762163 Ahy13g1448 13 18730971 18736067 PCT
Ahy8g1555 8 32360596 32364893 Ahy13g1448 13 18730971 18736067 PCT