Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0776 ATGTCTACAGATCAAATGGCTCTTGTTATACAAGTAAGAGCTTCTTCGCTTTCAAGCTCAATTCATCATCCTCGTCACAATTCCATGCATCCACCATGGAACTTGTCGCTACAAACATCTAAAGGCCAAGGGACTCTTATGCATAGTAAAAAATTATCTATCAATTCCGTTCTTCTTCGTGAGAAGGCGGAGTGTCTTGAAAGTAATGATAGGAAGAAAAGCTTGGAGCAGGTGAAGAAAGAAGGGCAAGAAGCATTGCTAAAAAAGTCAAGCGATCCAGTGGGAACAATGAAAATAATTGATAGCATTCAAGAGCTGGGAATTGGGCACCATTTTGAAGAAGAGATCAATGCACTTCTTGGAAAGATATGCCACTGGGATGCCTCACAAGACCTATTTGCCACATCCCTTCAATTTCGCCTCCTCAGGCACAATGGCTGGACCACTTTTCCTGAGAATTTCAACAAGTTTTTGGACAAGAGTGGGAATTTCAAGGAATCACTGAGCAGAGACATAGGTGGCATGCTAAGTTTGTACGAGGCATCATTTCTAGGTGCTGAAGGTGAAGGAGTGTTACAACAAGCCATGGACTTCTCAAGAGGCCATCTTCACCAATCAATCCCTCACATGGCTCCTGAATTAGGAAGACAAGTTAGCAGAGCCTTAAGGCTTCCAAGGCACCTTCAAATGGAGAGGTTAGAAGCCAAGAATTACATGGACCAATACAGCCGTACAACAACCAAAATACCAGCTCTTTTGGAATTGGCCAAGTTGGATTATGACATGCTTCAATCATTGTACAAAAGAGAATTAGGAGAAATCACCAGGTGGTGGAAGGAATTAGGACTAATAGAGAGCCTTGGTTTTGCTAGAGATAGACCATCAGAGTGCTTTCTATGGACAGTGGGGATTTTCCCAGAACCACGTTATTCCAACTGCCGTATTGAACTTACTAAAACAGTATGCATTTTGCTTGTTATGGATGATATCTTCGATACTTACGGCTCTTTCGATGATCTTGTTCTTTTCGTCAAGGCAATCAAAAGATGGGATCTTGATGCAATGGAGCAGCTACCTGAATACATGAAAATATGCTACATGGCATTATATAACACAACTCACGAAATTGCATACAAAATTCAGAAAGACCGTGGACTGACCGCTGTTGCCTACTTGAAGAAAACGTGGATAGACATATTTGAAGCATTTCTTGAGGAAGCCAAATGGTTCAACCAGGGTTACGTGCCATCATTTAGGGAATATCTGGACAACGGGGTGATTTCCGCAGGATCTTACATGGCCATGACGCATGCAACTTTCCTCGTTGGTGATGGTATCTCAAAGGATACTCTTTCAATGATGAAGACATACCCTAGGCTCTTCTCTTGTTCTGGCGAAATTCTTCGTTTTTGGGACGATTTGGGAACCTCAACGGAAGAACAAGAGAGAGGGGATAATGCTTGCAGCATACAGTGCTACATGAGGGAAAATAATGGTTGTGATGAGAATGAAGCAAGAAAACATATAAGGGGGCTCATAGGGAAGCTGTGGTTAGAGTTGAATGGTGTAGCCATGAACACGACCGCTCTGCCTTCTTCAATAGTGAAAGCTTGTTTCAACATGGCAAGAACTGCTCAGGTCATATATCAGCATGGCGATGACAAAAGCACATACACAGTTGATGACTACGTCCAAACATTGTTATTCACACCCTCTGCTATCTAA 1725 0.4243 MSTDQMALVIQVRASSLSSSIHHPRHNSMHPPWNLSLQTSKGQGTLMHSKKLSINSVLLREKAECLESNDRKKSLEQVKKEGQEALLKKSSDPVGTMKIIDSIQELGIGHHFEEEINALLGKICHWDASQDLFATSLQFRLLRHNGWTTFPENFNKFLDKSGNFKESLSRDIGGMLSLYEASFLGAEGEGVLQQAMDFSRGHLHQSIPHMAPELGRQVSRALRLPRHLQMERLEAKNYMDQYSRTTTKIPALLELAKLDYDMLQSLYKRELGEITRWWKELGLIESLGFARDRPSECFLWTVGIFPEPRYSNCRIELTKTVCILLVMDDIFDTYGSFDDLVLFVKAIKRWDLDAMEQLPEYMKICYMALYNTTHEIAYKIQKDRGLTAVAYLKKTWIDIFEAFLEEAKWFNQGYVPSFREYLDNGVISAGSYMAMTHATFLVGDGISKDTLSMMKTYPRLFSCSGEILRFWDDLGTSTEEQERGDNACSIQCYMRENNGCDENEARKHIRGLIGKLWLELNGVAMNTTALPSSIVKACFNMARTAQVIYQHGDDKSTYTVDDYVQTLLFTPSAI* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0776 574 SFLD Isoprenoid Synthase Type I 251 572 - -
Ahy18g0776 574 Pfam Terpene synthase family, metal binding domain 253 517 IPR005630 GO:0000287|GO:0010333|GO:0016829
Ahy18g0776 574 Gene3D - 91 248 IPR036965 GO:0010333|GO:0016829
Ahy18g0776 574 SFLD Terpene Cyclase Like 1 C Terminal Domain 251 572 IPR034741 -
Ahy18g0776 574 SUPERFAMILY Terpenoid synthases 250 571 IPR008949 -
Ahy18g0776 574 PANTHER OS04G0344100 PROTEIN-RELATED 48 571 - -
Ahy18g0776 574 CDD Terpene_cyclase_plant_C1 55 571 IPR044814 GO:0010333|GO:0016102
Ahy18g0776 574 PANTHER R-LINALOOL SYNTHASE PROTEIN-RELATED 48 571 - -
Ahy18g0776 574 Gene3D Farnesyl Diphosphate Synthase 68 557 IPR008949 -
Ahy18g0776 574 Pfam Terpene synthase, N-terminal domain 70 222 IPR001906 GO:0010333|GO:0016829
Ahy18g0776 574 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 71 245 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0776 Ahy-Chr18 8757898 8762163 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0776 - - gmx:100807904 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0776 18 8757898 8762163 Ahy8g1555 8 32360596 32364893 hybridization
Ahy18g0776 18 8757898 8762163 Ahy13g1448 13 18730971 18736067 PCT