Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1233 ATGGAGTTGTTTTCCTCTTCCCTCACTGCTACTACTATACTACTCTATGTAGTAACGCCATTATTGTACTTGTGCTTCCTTGTGTGGAAGGTGGTGAATCACAAAAGGGACCATGAATGCTACATTTTAGGGTACCAATGCTACAAGCCAGGCGATGATAGAAAGCTTGGAACTCAATGCAGCGGCAGCATCATATCCAGGAACAAAACCTTGGCTCTCAACGACTTCAAGTTCCTTCTCAAAGCCATTGTCAGCTCCGGCATTGGCGAAGAAACTTACGTTCCAAGGAACTTCCTCCAAGGCCGCGAGTCTAACCCTACCGTAAACGACGCCGTTTCGGAAATGGACGAGTTTTTCCACGACTCGATCGCCAAACTCCTCGCCAAAACCGGCGTCTCCGCCTCTGACATCGACGTCCTAGTGGTCAACGTCTCCATGTTCCCGTCAGTCCCGTCGCTGACTTCAAGAATCATCAATCACTACAAGATGAGGGACGACGTGAAGGCTTTCAACCTCACCGGCATGGGGTGCAGTGCAAGCTTGGTATCTCTTGACGTAGTCCAGAACATTCTCAAGTCGCAGAGAAACAAGTGTGCTTTGTTGGTTACTTCAGAGTCCTTGAGCCCTAACTGGTACTCAGGGAACGACAGATCCATGGTCCTCGCCAATTGTTTGTTTCGAACCGGAGGATGCGCTATTCTTTTGAGTAACAAGAGTTGGTTGAAGCATAAAGCCATATTCAAGCTCAAGTGCTTGGTGAGAACCCACCATGGCGCCAAAGATGATGCATACGGTTGTTGCAACCAAAAGGAGGACGATGAAGGTAGGCTTGGGTTCTACCTAGGGAAGAATCTCCCTAAGGCAGCAACAAGAGCCTTTGTTGACAATTTAAGAGTCTTATCCCCCAAGATTTTACCAGCTAGGGAGATGCTTAGATTCTTACTCGTTTCCCTCCTCAGAAAATTTAAATCTGTCACGTCAGCACCTAAAGTAGCAGCTCTAGCAACAAACACAAAATATGGTAATAAATCGCCTTTGAATTTAAAGACCGGAGTAGATCATTTCTGTTTGCACACGGGAGGGAAGGCGGTTATTGATGGGATAGGGATGAGTTTGGATCTGAGTGAGTATGATCTGGAGCCGGCGAGGATGACGCTGCACCGGTTTGGGAACACGTCAGCAAGCAGCTTGTGGTATGTTTTAGCGTACATGGAAGCTAAGAGGAGGCTCAAGAGAGGGGACAGGGTATTGATGATAAGCTTTGGTGCGGGATTTAAATGTAACAGCTGTTTGTGGCAAGTAATGAAGGATGTTGAGGATAGGAATGTGTGGGATGAATGCATTGATCAGTATCCACCACACTCCCTTGCCAACCCCTTCATGGAGCAGTACGGTTGGATCAATGCTGTTCAGGATCCAACCAACTTCAACCTTCTTAGTCAACCTGCTACTAACTAA 1458 0.4719 MELFSSSLTATTILLYVVTPLLYLCFLVWKVVNHKRDHECYILGYQCYKPGDDRKLGTQCSGSIISRNKTLALNDFKFLLKAIVSSGIGEETYVPRNFLQGRESNPTVNDAVSEMDEFFHDSIAKLLAKTGVSASDIDVLVVNVSMFPSVPSLTSRIINHYKMRDDVKAFNLTGMGCSASLVSLDVVQNILKSQRNKCALLVTSESLSPNWYSGNDRSMVLANCLFRTGGCAILLSNKSWLKHKAIFKLKCLVRTHHGAKDDAYGCCNQKEDDEGRLGFYLGKNLPKAATRAFVDNLRVLSPKILPAREMLRFLLVSLLRKFKSVTSAPKVAALATNTKYGNKSPLNLKTGVDHFCLHTGGKAVIDGIGMSLDLSEYDLEPARMTLHRFGNTSASSLWYVLAYMEAKRRLKRGDRVLMISFGAGFKCNSCLWQVMKDVEDRNVWDECIDQYPPHSLANPFMEQYGWINAVQDPTNFNLLSQPATN* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1233 485 Gene3D - 81 434 IPR016039 GO:0016746
Ahy8g1233 485 CDD CHS_like 21 432 - -
Ahy8g1233 485 Pfam FAE1/Type III polyketide synthase-like protein 34 321 IPR013601 GO:0006633|GO:0016020|GO:0016747
Ahy8g1233 485 SUPERFAMILY Thiolase-like 33 435 IPR016039 GO:0016746
Ahy8g1233 485 PANTHER 3-KETOACYL-COA SYNTHASE 14 473 - -
Ahy8g1233 485 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 352 433 IPR013747 -
Ahy8g1233 485 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 466 IPR012392 GO:0006633|GO:0016020|GO:0016747
Ahy8g1233 485 PANTHER 3-KETOACYL-COA SYNTHASE 14 473 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1233 Ahy-Chr8 27714334 27716358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1233 23 478 Acyl Lipid Metabolism Gene Families AT1G07720 65.000 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1233 K15397 - gmx:100776947 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0427 18 3642193 3644296 Ahy8g1233 8 27714334 27716358 hybridization
Ahy8g1233 8 27714334 27716358 Ahy13g0409 13 4270738 4272860 PCT
Ahy13g0409 13 4270738 4272860 Ahy8g1233 8 27714334 27716358 PCT