Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0409 ATGACACTCCCCCAAATCAAAGTTCTAATCCCAAAACACAAACACACTCTCTCTTTCTTTCTCTCTTTATACATGGATCTCATCACTTTACTAACCCTCCTTCCAGCATTGTACTTGTGTTTCCTGATCTGGAACTTGTTCGATCAGAAAAGGGACCAAGAGTGCTACATATTGGACTACCAATGTTACAAACCTTCTGATGATAGAAAGCTAGGCACAGAGTTCTGCGGGAAAGTCATCAAAAGATCCCAATCCTTAGGCCTTGATGAGTACAAGTTCCTCCTCAAAGCCATTGTTAGCTCCGGCATTGGTGAGCAAACTTATGCTCCAAGAAACGTCTTCGACGGCCGCGAATCAAACCCTACCCTTATCGACGGTATTGTGGAAATGGAGGAGTTTTTCAACGATAGCATTGAAAAATTGTTGTCGAGGACAGGTGTAAACCCATCGGAGATTGATGTGTTGGTTGTTAATATTTCAATGCTGGCGGTTCTTCCTTCTTTGTCGTCCAGAATCATCAACAAATACAAGCTAAGGCATGACATCAAGGTCTACAACCTCACCGGTATGGGGTGTAGTGCTAGTCTTATTTCTTTGGACATTGTAAAGAACATTTTCAAGTCGCAAAGGAATAAGCTAGCACTCTTGGTAACTTCAGAGAGCTTGAGTCCAAATTGGTATTCAGGTAACGAGAGATCAATGATTCTCGCTAATTGCTTGTTTCGCTGCGGCGGTTGCGCGATTTTGTTGACGAACAAGAGGACATTGAAGCACAAATCAATGTTCATATTGAAGTGTTTGGTGAGAACTCATCATGGAGCTAGAGATGAAGCTTATGGTTGTTGCATTCAAAAGGAAGATGAACAAGGTAGACTTGGTTTTCACCTTGGGAAAACCCTCCCAAAAGCAGCAACAAGAGCTTTCATTGACAATTTGAGGGTGATTTCACCCAAGATTCTTCCAACAAGGGAATTACTAAGATTCTTTGTTGTATACCTAATAAAGAAAATCACAATGTTGGGAAAAAATAACAATTATAACACTCTCAAGGCTAGTTCTGGAGTTATCACAACGACGAAATCGCCGTTAAATTTTAAAACCGGCGTGGATCATTTCTGTATCCACACCGGAGGTAAAGCAGTTATAGACGGAATAGGAATAAGTTTAGATTTGGCTGAGTATGACCTCGAACCGGCGCGAATGACTCTGCACCGGTTCGGGAACACCTCAGCCAGTAGCCTTTGGTATGTTCTAGGGTACATGGAGGCAAAGAAGAGGCTGAGAAAAGGTGAGAGGGTGTTCATGATAAGCTTTGGTGCTGGCTTTAAATGCAATAGCTGTTTGTGGGAAGTGATGAGAGATCTCAAAGGTGATCAAGAGAATGTGTGGGCCGATTGCATTGATAACTACCCACCAAAATCATTGTCTAACCCTTTCATGGAGAAGTATAGTTGGATCAATGATGTTGAGGATGAAAGCACCGCTGAGATCCCTGATTTTCTCAAGTAA 1509 0.4215 MTLPQIKVLIPKHKHTLSFFLSLYMDLITLLTLLPALYLCFLIWNLFDQKRDQECYILDYQCYKPSDDRKLGTEFCGKVIKRSQSLGLDEYKFLLKAIVSSGIGEQTYAPRNVFDGRESNPTLIDGIVEMEEFFNDSIEKLLSRTGVNPSEIDVLVVNISMLAVLPSLSSRIINKYKLRHDIKVYNLTGMGCSASLISLDIVKNIFKSQRNKLALLVTSESLSPNWYSGNERSMILANCLFRCGGCAILLTNKRTLKHKSMFILKCLVRTHHGARDEAYGCCIQKEDEQGRLGFHLGKTLPKAATRAFIDNLRVISPKILPTRELLRFFVVYLIKKITMLGKNNNYNTLKASSGVITTTKSPLNFKTGVDHFCIHTGGKAVIDGIGISLDLAEYDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLRKGERVFMISFGAGFKCNSCLWEVMRDLKGDQENVWADCIDNYPPKSLSNPFMEKYSWINDVEDESTAEIPDFLK* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0409 502 PANTHER 3-KETOACYL-COA SYNTHASE 25 492 IPR012392 GO:0006633|GO:0016020|GO:0016747
Ahy13g0409 502 PANTHER 3-KETOACYL-COA SYNTHASE 25 492 - -
Ahy13g0409 502 Pfam FAE1/Type III polyketide synthase-like protein 49 336 IPR013601 GO:0006633|GO:0016020|GO:0016747
Ahy13g0409 502 Gene3D - 99 451 IPR016039 GO:0016746
Ahy13g0409 502 SUPERFAMILY Thiolase-like 41 255 IPR016039 GO:0016746
Ahy13g0409 502 CDD CHS_like 43 449 - -
Ahy13g0409 502 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 485 IPR012392 GO:0006633|GO:0016020|GO:0016747
Ahy13g0409 502 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 369 450 IPR013747 -
Ahy13g0409 502 SUPERFAMILY Thiolase-like 267 452 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0409 Ahy-Chr13 4270738 4272860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0409 43 499 Acyl Lipid Metabolism Gene Families AT2G28630 70.065 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0409 K15397 - gmx:100809149 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0409 13 4270738 4272860 Ahy13g0409 13 4270738 4272860 ECH
Ahy18g0427 18 3642193 3644296 Ahy13g0409 13 4270738 4272860 ECH
Ahy18g0427 18 3642193 3644296 Ahy13g0409 13 4270738 4272860 PCT
Ahy8g1233 8 27714334 27716358 Ahy13g0409 13 4270738 4272860 PCT
Ahy13g0409 13 4270738 4272860 Ahy18g0427 18 3642193 3644296 PCT
Ahy13g0409 13 4270738 4272860 Ahy8g1233 8 27714334 27716358 PCT