Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1208 ATGGGAGACATGGTGGACTATTCTAATTCTAACATGACCAGGAACCCCAAACAAGGCAGTGTTGCAACTGGGAAAAAATCATATAGAAAATCACTGATTTTGTCTCGCCCTAAATCTGTTGTGCTGAGATATCATCAGCACCTTGTTTCACTGATTGATGGTGACTTTGGAACCAGTGCCGTCGGCCGCATCACAATTTTTGCGCTTAAAGTTGCTGCTTTAGAGATTGTAAGGAGGTTCTCCAAAAGCAAATGTCCATTTGTATGGAAAGGCCTTCAGGCACTCCAGATACTCTGTTATCCGCCTTTCCAATGGATTCAGAGATGGGCACCCTTTAAAGGTTTAGTGGAAAGTATGCAGGTCCTATCAAGACCACTACTAGCCCTTTCAATTGCAACAATTTTCTCTGACCAATCAGAATTAAGTGATGGAAAGTCAGATTGTGTTACTGATTCACATAGTGATTTAGTAAAATCCTCAGAATTATCTACTGTGCAGGCTGATATGAATACAAGTCAGTGCTCGACAGATTCCAAAATTTTAGAATCTGAATATTGGTTGTCTCAACTCTTTCAAGAGCTTGAAAGTCAAGGGATTTGTTTGCCAGAAAGAATCAATAATGATGAGCTCCGAAGATTTTATGCAGCTTCTAATAATGACTTTTCATGCTTCCTTACCTCAATCAAAAAGACCGTACGCTGGCGAGAGGCTTACAGAATTCTTACTGAAGAAGAGCTGGAAAAGTGGTCAAAAGTTGTGTTTTGGCATGGATATGATGTGATGCACAGACCTTGCCTCATTGTAAAGCTTGGGCTAGCTTGCAGTACACTGGCATCTGAAGATAGACCTCGATTTGCTCAGGCAGTGGTATCACATGTAGAACATGGAATCGTGCAGTTGGTTGATGCAGACAATCCCCAAATTACTGTCTTGGTGGACTGCGAAGGGTTATCTCCATTGAAAATTCCCATGCAAATGATGAAATCTTGTTGTTCGCTGCTGCAAGAGCACTTCCCAAATCGTCTTGGTTGTTTGTTTGTCATACGACTCCCAGAAGTTCTTAATTTTACTGCCCAGAGCTTTATCCAGAGTTTGGAGCCTACAACTCGGAAAAAGTTGAAAATGGAAGGGAAGATGTATCATAAGGTTCTTACTGATAATCTTCCAGCACTGCCATCATATCTCGGAGGCTGCTGCACTTGCTCAGAATGCTCTGAAATTAGCAATGGTAGAATGCTGCAACCTCATACAGCAGGGACCAGCAGGGGAGATAATGTGGGAGGTATTAGTGATAGTGACAATGAGGATTCAACATCATTGCATTTGCATCGTTCCAATGAATCCGAAGATCATTCGTTTGGTAACTATGAGCAGTTGTTGAGAACCGTTCTCATAGGTTTTCTCATATTTTGGGTTTTCATATCTCTTGGATTTGTTATGTATGATGCCGGTAGTCACCATTTCCTCTCATCATAA 1476 0.4146 MGDMVDYSNSNMTRNPKQGSVATGKKSYRKSLILSRPKSVVLRYHQHLVSLIDGDFGTSAVGRITIFALKVAALEIVRRFSKSKCPFVWKGLQALQILCYPPFQWIQRWAPFKGLVESMQVLSRPLLALSIATIFSDQSELSDGKSDCVTDSHSDLVKSSELSTVQADMNTSQCSTDSKILESEYWLSQLFQELESQGICLPERINNDELRRFYAASNNDFSCFLTSIKKTVRWREAYRILTEEELEKWSKVVFWHGYDVMHRPCLIVKLGLACSTLASEDRPRFAQAVVSHVEHGIVQLVDADNPQITVLVDCEGLSPLKIPMQMMKSCCSLLQEHFPNRLGCLFVIRLPEVLNFTAQSFIQSLEPTTRKKLKMEGKMYHKVLTDNLPALPSYLGGCCTCSECSEISNGRMLQPHTAGTSRGDNVGGISDSDNEDSTSLHLHRSNESEDHSFGNYEQLLRTVLIGFLIFWVFISLGFVMYDAGSHHFLSS* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1208 491 MobiDBLite consensus disorder prediction 1 24 - -
Ahy8g1208 491 Gene3D - 180 422 IPR036865 -
Ahy8g1208 491 SMART sec14_4 247 400 IPR001251 -
Ahy8g1208 491 MobiDBLite consensus disorder prediction 415 449 - -
Ahy8g1208 491 Pfam CRAL/TRIO domain 250 397 IPR001251 -
Ahy8g1208 491 MobiDBLite consensus disorder prediction 415 435 - -
Ahy8g1208 491 CDD SEC14 243 397 IPR001251 -
Ahy8g1208 491 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 10 488 - -
Ahy8g1208 491 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 243 403 IPR001251 -
Ahy8g1208 491 SUPERFAMILY CRAL/TRIO domain 251 402 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1208 Ahy-Chr8 27454108 27457493 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1208 - - gmx:100786215 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0404 18 3451047 3454382 Ahy8g1208 8 27454108 27457493 hybridization
Ahy8g1208 8 27454108 27457493 Ahy13g0444 13 4585898 4590236 PCT
Ahy13g0444 13 4585898 4590236 Ahy8g1208 8 27454108 27457493 PCT