Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0444 ATGGGAGAGAGGGTGGAAGGTTCTAATTTGAGCGTGACTGCTAAACCGAACAATGCTACTTACAAAAAGCCTCTGGTGGCATCTCGCCCCAAAGATTTTGAACACAGAAATACTGAACACCTTCTTTCTTTGACCCGTGATGGATTTGGAAGCAGCCCTGTAGGCCGTCTCACATTTTTTCTAATCAAAGTTGCGGCACTAGAGGCCGTAAGAAGGGTATCCAAGAGTAGATGTCCATGTGTATGGCGAGGTTTACAGGGTCTACAAATCCTTGTCTATCCACCATTTAAATGGATTCAGAGATGGTCACCCTTCAAGGGTTTGGTCAGAAGTATGCAGGTACTATCAAGACCATTATTAGTCCTTTCCATTGCAACTGTTTTTACAGACGAATCACAATGTAGTGATGGGACACCAGAGTATATTACTGATCCCCATGATTCAGAAGCATCTGCAGATCTGTCTTCAGTCCCAGCCAATTCAAGTATAGGTCATAGCGAGAGCGATCCTGAAGTTTTAGAATATGAGAAATGGTTGACTCAGCTCAAGCAAGAGTTGGAAATTCAAGGGATTAGTTTGCCAGAAAGAATCGATGACGATGAGCTCCACAGATTTTACTCAGCTTGTAATAATGACGTTTCAAGCTTCTTTACAGCAATCAAGAAGACAATTCAATGGCGGGGGAGTTACAAAATTTTGTCAGAAGAAGAGCTAGAGAGTTGGTCAAGTTTGGTGTTCTGGCATGGGTTTGATGTGATGCAAAGACCTTGCCTTATTGTAAGGCTTGGCCTAGCTTGTAGATCATTGGTGTCTCGTGATAGACCTCAATTTGCTCAGGCAGTTATATCACAGGTTGAATATGGAGTCTTGCACTTGGTCAGTGCGGACAACCCTCAGATTACAGTATTGGTGGACTGTGAAGGGCTATCTCCGTTGAGAATTCCCATGAAAACCTTGAGATCTTGTTCTTCCCTTCTGCAAGATCACTTTCCTAATCGACTTGGTGGTTTGTTTGTCATACGACTACCATCTGTTGTTCGAGTCATTGCCCAGACATTTATTTCGGTTTTAAAGCCAACTACCAGGAAAAAGTTGAAAATAGGAGAGATTCATCAGAAATTTCTTCGTGATAATCTGCCGACACTACCAGCATACCTTGGAGGGTCCTGCACTTGCATTGTATGTTGTAGAATTGGCAAGAGGCATGTGCTCCAACCTGGTGCAACTGGAACCAGCAGCATACATAGGGAGATAAATATCAGTGACAATGAGGATTCTTCATCACTGCATTCATCATCTAATAGTGACTTGGATGAGCAGCAGAACAATAAATATGACCAGTGGTTGAAAACAGCCATCATAAGCATTCTAGTATTTTGGGTTTTGGTAGCTATTTCTGCTGGAATATACACTCCTGAAAATCGTTTGGTCTAA 1434 0.4247 MGERVEGSNLSVTAKPNNATYKKPLVASRPKDFEHRNTEHLLSLTRDGFGSSPVGRLTFFLIKVAALEAVRRVSKSRCPCVWRGLQGLQILVYPPFKWIQRWSPFKGLVRSMQVLSRPLLVLSIATVFTDESQCSDGTPEYITDPHDSEASADLSSVPANSSIGHSESDPEVLEYEKWLTQLKQELEIQGISLPERIDDDELHRFYSACNNDVSSFFTAIKKTIQWRGSYKILSEEELESWSSLVFWHGFDVMQRPCLIVRLGLACRSLVSRDRPQFAQAVISQVEYGVLHLVSADNPQITVLVDCEGLSPLRIPMKTLRSCSSLLQDHFPNRLGGLFVIRLPSVVRVIAQTFISVLKPTTRKKLKIGEIHQKFLRDNLPTLPAYLGGSCTCIVCCRIGKRHVLQPGATGTSSIHREINISDNEDSSSLHSSSNSDLDEQQNNKYDQWLKTAIISILVFWVLVAISAGIYTPENRLV* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0444 477 CDD SEC14 245 388 IPR001251 -
Ahy13g0444 477 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 235 394 IPR001251 -
Ahy13g0444 477 SUPERFAMILY CRAL/TRIO N-terminal domain 176 233 IPR036273 -
Ahy13g0444 477 MobiDBLite consensus disorder prediction 149 167 - -
Ahy13g0444 477 MobiDBLite consensus disorder prediction 135 168 - -
Ahy13g0444 477 Pfam CRAL/TRIO domain 244 388 IPR001251 -
Ahy13g0444 477 SMART sec14_4 239 391 IPR001251 -
Ahy13g0444 477 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 12 475 - -
Ahy13g0444 477 SUPERFAMILY CRAL/TRIO domain 244 393 IPR036865 -
Ahy13g0444 477 Gene3D - 173 429 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0444 Ahy-Chr13 4585898 4590236 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0444 - - gmx:100814843 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0444 13 4585898 4590236 Ahy13g0444 13 4585898 4590236 ECH
Ahy18g0404 18 3451047 3454382 Ahy13g0444 13 4585898 4590236 PCT
Ahy8g1208 8 27454108 27457493 Ahy13g0444 13 4585898 4590236 PCT
Ahy13g0444 13 4585898 4590236 Ahy18g0404 18 3451047 3454382 PCT
Ahy13g0444 13 4585898 4590236 Ahy8g1208 8 27454108 27457493 PCT