Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0404 ATGGGAGACATGGTGGACTATTCTAATTCTAACATGACCAGGAACCCCAAACAAGGCAGTGTTGCAACTGGGAAAAAATCATATAGAAAATCACTGATTTTGTCTCGCCCTAAATCTGTTGTGCTGAGATATCATCAGCACCTTGTTTCACTGATTGATGGTGACTTTGGAACCAGTGCCGTCGGCCGCATCACAGTTTTTGCGCTTAAAGTTGCTGCTTTAGAGATTGTAAGGAGGTTCTCCAAAAGCAAATGTCCATTTGTATGGAAAGGCCTTCAGGCACTCCAGATACTCTGTTATCCGCCTTTCCAATGGATTCAGAGATGGGCACCCTTTAAAGGTTTAGTGGAAAGTATGCAGGTCCTATCAAGACCACTACTAGCCCTTTCAATTGCAACAATTTTCTCTGACCAATCAGAATTAAGTGATGGAAAGTCAGATTGTGTTACTGATTCACATAGTGATTTAGTAAAATCCTCAGAATTATCTCCTGTGCAGGCTGATATGAATACAAGTCAGTGCTCGACAGATTCCAAAATTTTAGAATCTGAATATTGGTTGTCTCAACTCTTTCAAGAGCTTGAAAGTCAAGGGATTTGTTTGCCAGAAAGAATCAATAATGATGAGCTCCGAAGATTTTATGCAGCTTCTAATAATGACTTTTCATGCTTCCTTACCTCAATCAAAAAGACCGTACGTTGGCGAGAGGCTTACAGAATTCTTACTGAAGAAGAGCTGGAAAAGTGGTCAAAAGTTGTGTTTTGGCATGGATATGATGTGATGCACAGACCTTGCCTCATTGTAAAGCTTGGGCTAGCTTGCAGTACACTGGCATCTGAAGATAGACCTCGATTTGCTCAGGCAGTGGTATCACATGTAGAACATGGAATCGTGCAGTTGGTTGATGCAGACAATCCCCAAATTACTGTCTTGGTGGACTGTGAAGGGTTATCTCCATTGAAAATTCCCATGCAAATGATGAAATCTTGTTGTTCGCTGCTGCAAGAGCACTTCCCAAATCGTCTTGGTTGTTTGTTTGTCATACGACTCCCAGAAGTTCTTAATTTTACTGCCCAGAGCTTTATCCAGAGTTTGGAGCCTACAACTCGGAAAAAGTTGAAAATGGAAGGGAAGATGTATCATAAGGTTCTTACTGATAATCTTCCAGCACTGCCATCATATCTCGGAGGCTGCTGCACTTGCTCAGAATGCTCTGAAATTGGCAATGGTAGAATGCTGCAACCTCATACAGCAGGGACCAGCAGGGGAGATAATGTGGGAGGTATTAGTGATAGTGACAATGAGGATTCAACATCATTGCATTTGCATCGTTCCAATGAATCCGAAGATCATTCGTTTGGTAACTATGAGCAGTTGTTGAGAACCATTCTCATAGGTTTTCTCATATTTTGGGTTTTCATATCTCTTGGATTTGTTATGTATGATGCCGGTAGTCACCATTTCCTCTCATCATAA 1476 0.4146 MGDMVDYSNSNMTRNPKQGSVATGKKSYRKSLILSRPKSVVLRYHQHLVSLIDGDFGTSAVGRITVFALKVAALEIVRRFSKSKCPFVWKGLQALQILCYPPFQWIQRWAPFKGLVESMQVLSRPLLALSIATIFSDQSELSDGKSDCVTDSHSDLVKSSELSPVQADMNTSQCSTDSKILESEYWLSQLFQELESQGICLPERINNDELRRFYAASNNDFSCFLTSIKKTVRWREAYRILTEEELEKWSKVVFWHGYDVMHRPCLIVKLGLACSTLASEDRPRFAQAVVSHVEHGIVQLVDADNPQITVLVDCEGLSPLKIPMQMMKSCCSLLQEHFPNRLGCLFVIRLPEVLNFTAQSFIQSLEPTTRKKLKMEGKMYHKVLTDNLPALPSYLGGCCTCSECSEIGNGRMLQPHTAGTSRGDNVGGISDSDNEDSTSLHLHRSNESEDHSFGNYEQLLRTILIGFLIFWVFISLGFVMYDAGSHHFLSS* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0404 491 MobiDBLite consensus disorder prediction 1 24 - -
Ahy18g0404 491 SMART sec14_4 247 400 IPR001251 -
Ahy18g0404 491 MobiDBLite consensus disorder prediction 415 449 - -
Ahy18g0404 491 MobiDBLite consensus disorder prediction 415 435 - -
Ahy18g0404 491 CDD SEC14 243 397 IPR001251 -
Ahy18g0404 491 Gene3D - 180 421 IPR036865 -
Ahy18g0404 491 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 10 488 - -
Ahy18g0404 491 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 243 403 IPR001251 -
Ahy18g0404 491 SUPERFAMILY CRAL/TRIO domain 251 402 IPR036865 -
Ahy18g0404 491 Pfam CRAL/TRIO domain 250 397 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0404 Ahy-Chr18 3451047 3454382 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0404 - - gmx:100786215 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0404 18 3451047 3454382 Ahy18g0404 18 3451047 3454382 ECH
Ahy18g0404 18 3451047 3454382 Ahy8g1208 8 27454108 27457493 hybridization
Ahy18g0404 18 3451047 3454382 Ahy13g0444 13 4585898 4590236 PCT
Ahy13g0444 13 4585898 4590236 Ahy18g0404 18 3451047 3454382 PCT