Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1138 ATGGGTTTTGAATTAGTGTTAGTTAGCATGGTTTTGGTGTTGGGTTGTGGTGGTGGTGAGGGTAAAGAGTGCACAAACCAGCCTACACAAACACACACATTTCGTTACCATTTGTTAACATCTAAAAACCAAACATGGAAACAAGAGGTAATGTCACATTCACGCTATCATTTGACTCCAATAAGGAACCTGTCCTTGAATGAGGAACAAGAAGATGATGATTGGACAATGCTGTTTGGGAGAATGAAGATGAAGAAGGAACCAGAGGGTTTACTGAAAGAAGTTTCGTTGCATGATGTGAGGTTGCATGGAGGTTCAATCCATGGTCAAGCACAGAACACAAACTTGAAGTATCTGTTAATGTTGGATGTTGACAGGTTGATTTGGAGCTTCAGGAAGACTTGTGGTCTCCCTACTCCTGGAACACCATATGGAGGCTGGGAAGATCCAACCATAGAAGTCCGGGGTCATTTTGTTGGGCATTATTTGAGTGCATCAGCTCTTATGTGGGCCAGCACACACAATGAAGCATTGAAGAAGAAAATGTCAGCACTTGTTGCAAATCTCTCTATCTGTCAGCAGAAGATTGGGACAGGATACCTTTCTGCATTTCCATCTGAGTTCTTTGATCGTTTTGAAGCAATTCAATATGTTTGGGCTCCCTATTATACCATTCACAAGATCATGGCTGGCCTTTTGGATCAACATTCTATTGCTGAGAACCCTCAAGCTCTGAAAATGGTGACATGGATGGTTGATTATTTTTACAAGAGAGTGAGGAATGTGATCAGAAAGTACAGCATAGATTGGCATTATCAAACCCTGAATGAGGAAACTGGAGGAATGAATGATGTCCTTTACAGACTATATTCCATTACAGGAGATCCAAAGCATCTATTACTGGCTCATCTTTTTGACAAGCCATGCTTTTTGGGGTTGCTTGCTGTAAAGGCTAATGATATAGCTCAATTTCATGCTAATACACATATCCCAGTTGTTGTTGGATCTCAAATGCGATATGAAGTCACCGGTGATCCGCTTTATAAGGAAATTGGAACATTCTTTATGGATATTGTTAACTCTTCACACAGCTATGCAACTGGAGGAACATCAGTGAATGAGTTTTGGTCTGATCCAAATAGAATGACAGAGACCCTAAAAGAAGGAAACAATGAAGAATCATGCACAACTTATAACATGTTGAAGGTTTCGCGCAACCTGTTTAGATGGACTAAGGAGATATCATATGCTGATTATTATGAACGTGCATTGACAAATGGAGTATTAAGCATTCAAAGAGGAACAGAACCTGGAGTTATGTTATACTATCTTCCACAAGGTCCTGGGGCCTCCAAAGCTATATCAAAATTCGGTTGGGGAACTCAGTTTAACTCTTTCTGGTGCTGCTATGGAACCGGAATTGAATCATTCTCAAAGCTTGGAGATTCCATCTACTTTGAAGAGGAAGGGGAAAATCCTAGTCTTTACATCATTCAATACATATCAAGCTCATTAAACTGGAAATCTGCTCAAATCATGCTTAACCAGACAGTTGTTCCTCCATCTTCAATGGATTCCTTTCTCAGAATCTCACTCACTTTTTCTCCTACTAAGAAAACTAGTAGTACTTCATCTACTCTTAACCTTCGGTTACCAACTTGGACACATATCCATGGTGCTAAACTCACATTAAATTCTGATACTTTACCTTTGCCTTCTCCAGGAAACTTTGTGTCAATAACCCGGAAATGGAGTGGTAGTGACAAGCTGACCCTTCAATTTCCCATTCCCCTAAGAACAGAGGCCATCAAAGATGACAGGCCTGAATATGCCTCCATTAGAGCAATTCTCTTTGGTCCCTACCTTCTTGCTGGACATAGCACTGCTGATTGGGACATTAAAACTGCTTCCAATGCTTCTATTACAGATTGGATTACTCCAATTCCAGCCATTTATAATACTCAGTTATTTTCATTCTACCAACACTTTTCAGGATCATCTTTTGTCTTAACAAGTTTAAACAATTCACTGACAATGGAAAAATCACCAAAGCCTGGGACTAGTTTGGCTCTTCATGCAACCTTTAGAATCATTAATATCCAAGCAAAACATTCCTCAAGGCTTTCAACTACACTGAGAGATTTTATTGGCAAATCAGTGATGTTAGAACCGTTTGATCATCCTGGAACACAAGTAGGTTCTGTTTTTGTTCTGGTAGCAGGATTGGATGGAAGAAATGAAAGCATATCCTTAGAATCCAAAAGCCATAAAGGGTGCTTTGTGCATAGTGGCATGAGTTCTGGTAAAGAAGTAAAAATAAGATGCAAGTCTAATTCTGATGCTGATGCTTCTAGTTTCAACAAAGATGCAAGCTTTATTGCTAGAAGAGGACTCAGAAAATATGATCCTATAAGCTTTGTGGCTAAGGGAGCAAATAGAAATTTTCTACTGGAGCCATTATTGGCCTTCAGAGATGAGCATTATACTGTTTATTTCAACATTCAAGAGTGA 2511 0.3955 MGFELVLVSMVLVLGCGGGEGKECTNQPTQTHTFRYHLLTSKNQTWKQEVMSHSRYHLTPIRNLSLNEEQEDDDWTMLFGRMKMKKEPEGLLKEVSLHDVRLHGGSIHGQAQNTNLKYLLMLDVDRLIWSFRKTCGLPTPGTPYGGWEDPTIEVRGHFVGHYLSASALMWASTHNEALKKKMSALVANLSICQQKIGTGYLSAFPSEFFDRFEAIQYVWAPYYTIHKIMAGLLDQHSIAENPQALKMVTWMVDYFYKRVRNVIRKYSIDWHYQTLNEETGGMNDVLYRLYSITGDPKHLLLAHLFDKPCFLGLLAVKANDIAQFHANTHIPVVVGSQMRYEVTGDPLYKEIGTFFMDIVNSSHSYATGGTSVNEFWSDPNRMTETLKEGNNEESCTTYNMLKVSRNLFRWTKEISYADYYERALTNGVLSIQRGTEPGVMLYYLPQGPGASKAISKFGWGTQFNSFWCCYGTGIESFSKLGDSIYFEEEGENPSLYIIQYISSSLNWKSAQIMLNQTVVPPSSMDSFLRISLTFSPTKKTSSTSSTLNLRLPTWTHIHGAKLTLNSDTLPLPSPGNFVSITRKWSGSDKLTLQFPIPLRTEAIKDDRPEYASIRAILFGPYLLAGHSTADWDIKTASNASITDWITPIPAIYNTQLFSFYQHFSGSSFVLTSLNNSLTMEKSPKPGTSLALHATFRIINIQAKHSSRLSTTLRDFIGKSVMLEPFDHPGTQVGSVFVLVAGLDGRNESISLESKSHKGCFVHSGMSSGKEVKIRCKSNSDADASSFNKDASFIARRGLRKYDPISFVAKGANRNFLLEPLLAFRDEHYTVYFNIQE* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1138 836 Pfam Beta-L-arabinofuranosidase, GH127 100 624 IPR012878 -
Ahy8g1138 836 SUPERFAMILY Six-hairpin glycosidases 155 431 IPR008928 GO:0005975
Ahy8g1138 836 PANTHER PROLINE-TRNA LIGASE (DUF1680) 7 835 - -
Ahy8g1138 836 SUPERFAMILY AbfB domain 733 816 IPR036195 GO:0046373|GO:0046556
Ahy8g1138 836 Gene3D - 715 819 - -
Ahy8g1138 836 PANTHER - 7 835 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1138 Ahy-Chr8 26582306 26586435 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1138 K09955 - gmx:100791803 1184.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0332 18 2803923 2807991 Ahy8g1138 8 26582306 26586435 hybridization
Ahy8g1138 8 26582306 26586435 Ahy13g0567 13 5908170 5913738 PCT