Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0567 ATGAAGAGGATGAAGGAGGAGGCTTCTGTTGTTCTCTTATTGCTTACTTTCTCACTTGTTGTGTGTTGTTGCTATGCACAGACAAAAGAGTGCACAAACATTCCAACACAATCACACTCCTTCCGCTATGAACTCTTAACTTCCAAGAATGAAACTTGGAAGAAAGAAGTGATGTCTCATTTCCATTTGACACCAACAGATGATTCAGCATGGGCTGATTTGCTTCCAAGGAGGTTCCTATCACAGAGGGACCAACATGATTGGGCATTCATGTACAGGAAAATCAAGAACCTTGGTGTGTTTAAGGACTCTCCTGAGGCTGCAGGGTTCCTCAAAGAGGTGCCTTTGCAGGATGTGAGGCTGCCGTTGGATTCAATCCATGGCAGGGCACAGAACACCAACTTGGAGTATCTCTTGATGTTGGATGTTGACAGGTTGCTTTGGAGTTTCAGGAAGACAGCTGGTCTTGATACTCCTGGGACACCTTATGGAGGATGGGAAGGTTCCAATGTTGAGCTCAGGGGTCATTTTGTTGGGCATTACTTAAGTGCATCAGCTCTAATGTGGGCGAGCACACAGAATGATAAATTGAAGGATAAAATGTCAGCCGTTGTCGCCGGTCTCTCTGCCTGTCAGCAGAAAATTGGAACTGGATATCTCTCTGCATTTCCATCTGAGTTTTTTGACAGATTTGAAGCTATTCAGCCTGTGTGGGCTCCCTATTACACCATTCACAAGATATTGGCCGGCCTGTTGGATCAACATACTTTTGCTGGAAATCCTCAAGCTCTAAAAGTTGTGACATGGATGGTTGATTACTTTTACAACCGAGTGTTGAATGTAATAACAAAGAACACTATAAGTAGGCACTATGAATCACTGAATGAGGAAACTGGGGGAATGAATGATGTCCTTTACAGATTATACACGTTAACGGCAGATCCAAAGCATTTAATGTTGGCTCACCTTTTTGACAAGCCATGTTTTTTAGGGTTGCTTGCTGTACAGGCTAATGACATAACTAATTTTCATGCTAATACACATATCCCCGTTGTTATTGGAGCTCAAATGCGGCATGAAGTCACTGGTGATCCACTTTATAAGGATATTGGGACATTCTTTATGGACATTATTAACTCTTCTCACAGCTATGCTACTGGAGGAACATCAGTGTCGGAGTTCTGGCATAATCCAAAGAGAATAGCAGACAACTTAAAAACAACAGAAACTGAAGAATCATGCACAACTTACAACATGTTGAAGGTTTCTCGCCACCTGTTTAGATGGACCAAGGAGGTTTCTTATGCAGATTATTATGAACGCGCCTTGACGAATGGTGTACTTAGCATTCAAAGGGGAACAGATCCTGGAGTGATGATTTATATGCTTCCCCTAGCCAGAGGGGTTTCCAAGGCCAAAACTGGACATGGCTGGGGAACACAGTTTGATTCTTTCTGGTGCTGCTATGGAACAGGAATTGAGTCATTCTCAAAGCTTGGAGATTCTATCTATTTTGAAGAGCAGGCGAATGAACCTACTCTTTATATCATTCAGTATATATCAAGCTCCTTTAATTGGAAATCTGGGGAAATTGAGATCAATCAAACCGTAGATCCAGTTGTTTCATGGGATCCTTACCTAAGAGTCACATTTACATTTTCTCCTAACGAGAAAACCGGGAGTACGTTGAAATTTCGCATACCATCTTGGACTAGTTTGGATGGTGCCAAAGCAACATTGAACGATGCAACTTTATCTCTACCAAGTCCTGGAAATTTTTTGTCAGTAAGCCGACAGTGGAGTGCAGGTGACAAACTGAAGCTTCAGTTGCCTATTACCATCAGAACAGAGGCCATAAAAGATGACAGGCCTGAATATGCATCTGTTCAAGCAATTCTTTATGGACCATATCTCCTTGCCGGCCATACAACCGGTGATTGGGACATTAACTCCAGCGGTAAAACAACTTCTGGAGATTGGATTACCCCAGTTTCTGCCAGCTACAATAGTCAACTATTCACTTTGTACCAAGGCTTTGCAAACTCAACTTATGCCTTAACAAACACAAACCAATCATCACTTACAATGGAATCATTACCTACATCTACACCAGACCCTGATTCTGCCATTGACAAAACATTTAGGCTAGTCCCAAAAGATCCTTCCACAAAGTTCTCTACATGGAAGGATCTTATTGGCAAATCCGTGACGATAGAACTATTTAATCCCCCTGGCATGTATGTGATTCACCAAGGACCAAACCAACCTCTTATTATTGATCAATCCAAAAGTGCGGCATCTTCTTCCTTTATCGTGGTACAAGGCTTGGATGGACAAAAGGAAACGGTATCTTTGAAATCTGAAAGCGATGATGGTTGCTTTGTTACCACTGATGGAGGAGTGAAGCTTAGTTGCAGTGGCTCTGGAGATGATTTTAACCAAGCAGCAAGCTTTGTTATAGAAGAAGGAATAAGGAAATATAATCCTATTAGCTTTGTGGCTAAGGGTGCAAACAGGGATTTTCTCTTGGAGCCATTGTTCACATTCAAAGATTTGCCTTATACTGTTTATTTCAACATTCAAAGTTGA 2589 0.4187 MKRMKEEASVVLLLLTFSLVVCCCYAQTKECTNIPTQSHSFRYELLTSKNETWKKEVMSHFHLTPTDDSAWADLLPRRFLSQRDQHDWAFMYRKIKNLGVFKDSPEAAGFLKEVPLQDVRLPLDSIHGRAQNTNLEYLLMLDVDRLLWSFRKTAGLDTPGTPYGGWEGSNVELRGHFVGHYLSASALMWASTQNDKLKDKMSAVVAGLSACQQKIGTGYLSAFPSEFFDRFEAIQPVWAPYYTIHKILAGLLDQHTFAGNPQALKVVTWMVDYFYNRVLNVITKNTISRHYESLNEETGGMNDVLYRLYTLTADPKHLMLAHLFDKPCFLGLLAVQANDITNFHANTHIPVVIGAQMRHEVTGDPLYKDIGTFFMDIINSSHSYATGGTSVSEFWHNPKRIADNLKTTETEESCTTYNMLKVSRHLFRWTKEVSYADYYERALTNGVLSIQRGTDPGVMIYMLPLARGVSKAKTGHGWGTQFDSFWCCYGTGIESFSKLGDSIYFEEQANEPTLYIIQYISSSFNWKSGEIEINQTVDPVVSWDPYLRVTFTFSPNEKTGSTLKFRIPSWTSLDGAKATLNDATLSLPSPGNFLSVSRQWSAGDKLKLQLPITIRTEAIKDDRPEYASVQAILYGPYLLAGHTTGDWDINSSGKTTSGDWITPVSASYNSQLFTLYQGFANSTYALTNTNQSSLTMESLPTSTPDPDSAIDKTFRLVPKDPSTKFSTWKDLIGKSVTIELFNPPGMYVIHQGPNQPLIIDQSKSAASSSFIVVQGLDGQKETVSLKSESDDGCFVTTDGGVKLSCSGSGDDFNQAASFVIEEGIRKYNPISFVAKGANRDFLLEPLFTFKDLPYTVYFNIQS* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0567 862 PANTHER - 12 862 - -
Ahy13g0567 862 PANTHER PROLINE-TRNA LIGASE (DUF1680) 12 862 - -
Ahy13g0567 862 Gene3D - 731 848 - -
Ahy13g0567 862 SUPERFAMILY AbfB domain 765 842 IPR036195 GO:0046373|GO:0046556
Ahy13g0567 862 Pfam Beta-L-arabinofuranosidase, GH127 119 640 IPR012878 -
Ahy13g0567 862 SUPERFAMILY Six-hairpin glycosidases 175 451 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0567 Ahy-Chr13 5908170 5913738 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0567 K09955 - gmx:100781521 1303.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0567 13 5908170 5913738 Ahy13g0567 13 5908170 5913738 ECH
Ahy18g0332 18 2803923 2807991 Ahy13g0567 13 5908170 5913738 PCT
Ahy8g1138 8 26582306 26586435 Ahy13g0567 13 5908170 5913738 PCT