Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0332 ATGGGTTTTGTGTTAGTGTTAGTTAGCATGGTTTTGGTGTTGGGTTGTGGTGATGGTGAGGGTAAAGAGTGCACAAACCAGCCTACACAATCACACACATTTCGTTACCATTTGTTAACATCTAAAAACCAAACACGGAAACAAGAGGTAATGTCACATTCGCGCTATCATTTGACTCCAATAAGGAACATGTCCTTGAATGAGGAACAAGAAGAAGAAGAAGAAGGGCAAGATGATGATTGGACAATGCTGTATGGGAGAATGAAGATGAAGAAGGAACCAGAGGGTTTACTGAAAGAAGTTTCGTTGCATGATGTGAGGTTGCATGGAGGTTCAATCCATGGTCAAGCACAGAACACAAACTTGAAGTATCTGTTAATGTTGGATGTTGACAGGTTGATTTGGAGCTTCAGGAAGACTTGTGGTCTCCCTACTCCTGGAACACCATATGGAGGCTGGGAAGATCCAACCATAGAAGTCCGGGGTCATTTTGTTGGGCATTATTTGAGTGCATCAGCTCTAATGTGGGCTAGCACACACAATGAAGAATTGAAGAAGAAAATGTCAGCACTTGTTGCAAATCTCTCTATCTGTCAGCAGAAGATTGGGACAGGATACCTTTCTGCATTTCCATCTGAGTTCTTTGATCGTTTTGAAGCAATTCAATATGTTTGGGCTCCCTATTATACCATTCACAAGGGAGATCCAAAGCATCTATTACTTGCTCATCTTTTTGACAAGCCATGCTTTTTGGGGTTGCTTGCTGTAAAGGCTAATGATATAGCTCAATTTCATGCTAATACACATATCCCAGTTGTTGTTGGATCTCAAATGCGATATGAAGTCACCGGTGATCCGCTTTATAAGGAAATTGGAACATTCTTTATGGATATTGTTAACTCTTCACACAGCTATGCAACTGGAGGAACATCAGTGAATGAGTTATGGTCTGATCCAAATAGAATGATAGAGACCCTAAAAGAAACAAACAATGAAGAATCATGCACAACTTATAACATGTTGAAGGTTTCGCGCAACCTGTTTAGATGGACTAAGGAGATATCATATGCTGATTATTATGAACGTGCATTGACAAATGGAGTATTAAGCATTCAAAGAGGAACAGAACCTGGAGTTATGTTATACTATCTTCCACAAGGTCCTGGGGCCTCCAAGGCTATATCAAAATTCGGTTGGGGAACTCAGTTTAACTCTTTCTGGTGCTGCTATGGAACCGGAATTGAATCATTCTCAAAGCTTGGAGATTCCATCTACTTTGAAGAGGAAGGGAAAAATCCTAGTCTCTACATCATTCAATACATATCAAGCTCATTAAACTGGAAATCTGCTCAAATCATGCTTAACCAGACAGTTGTTCCTCCATCTTCAATGGATTCTTTTCTCAGAATCTCACTCACTTTTTCTCCTACTAAGAAAACTAGTAGTACTTCATCTACTCTTAACCTTCGGTTACCAACTTGGACACATATCCATGGTGCTAAACTCACATTAAATTCTGATACTTTACCTTTGCCTTCTCCAGGAAACTTTGTGTCAATCACGCGGAAATGGAGTGGTAGTGACAAGTTGACCCTTCAATTTCCCATTCCCCTAAGAACAGAGGCCATCAAAGATGACAGGCCTGAATATGCCTCCATTAGAGCAATTCTCTATGGTCCCTACCTTCTTGCTGGACATAGCACTGCTGATTGGGACATTAAAACTGCTTCCAATGCTTCTATTACAGATTGGATTACTCCAATTCCAGCCATTTACAATACTCAGTTATTTTCATTCTACCAACACTTTTCAGGATCATCTTTTATCTTAACAAGTTTAAAAAATTCACTGACAATGAAAAAATCACCAAAGCCTGGGACTAGTTTGGCTCTTCATGCAACCTTTAGAATCATTAATATCCAAGCAAAACATTCCTCAAGGATTTCAACTACACTGAGAGATTTTATTGGCAAATCAGTGATGTTAGAACCGTTTGATCTTCCTGGAACACAAGTAGGTTCTGTTTTTGTTCTGGTATCAGGATTGGATGGAAGAAATGAAAGCATATCCTTAGAATCCAAAAGCCATAAAGGGTGCTTTGTGCATAGTGGCATGAGTTCTGGTAAAGAAGTAAAAATAAGATGCAAGTCTAATTCTGATGCTGATGCTTCTAGTTTCAACAAAGATGCAAGCTTTATTGCTAGAAGAGGACTCAGAAAATATGATCCTATAAGCTTTGTGGCTAAGGGAGCAAATAGGAATTTTCTACTGGAGCCATTATTGGCCTTCAGAGATGAGCATTATACTGTTTATTTCAACATTCAAGAGTGA 2331 0.3934 MGFVLVLVSMVLVLGCGDGEGKECTNQPTQSHTFRYHLLTSKNQTRKQEVMSHSRYHLTPIRNMSLNEEQEEEEEGQDDDWTMLYGRMKMKKEPEGLLKEVSLHDVRLHGGSIHGQAQNTNLKYLLMLDVDRLIWSFRKTCGLPTPGTPYGGWEDPTIEVRGHFVGHYLSASALMWASTHNEELKKKMSALVANLSICQQKIGTGYLSAFPSEFFDRFEAIQYVWAPYYTIHKGDPKHLLLAHLFDKPCFLGLLAVKANDIAQFHANTHIPVVVGSQMRYEVTGDPLYKEIGTFFMDIVNSSHSYATGGTSVNELWSDPNRMIETLKETNNEESCTTYNMLKVSRNLFRWTKEISYADYYERALTNGVLSIQRGTEPGVMLYYLPQGPGASKAISKFGWGTQFNSFWCCYGTGIESFSKLGDSIYFEEEGKNPSLYIIQYISSSLNWKSAQIMLNQTVVPPSSMDSFLRISLTFSPTKKTSSTSSTLNLRLPTWTHIHGAKLTLNSDTLPLPSPGNFVSITRKWSGSDKLTLQFPIPLRTEAIKDDRPEYASIRAILYGPYLLAGHSTADWDIKTASNASITDWITPIPAIYNTQLFSFYQHFSGSSFILTSLKNSLTMKKSPKPGTSLALHATFRIINIQAKHSSRISTTLRDFIGKSVMLEPFDLPGTQVGSVFVLVSGLDGRNESISLESKSHKGCFVHSGMSSGKEVKIRCKSNSDADASSFNKDASFIARRGLRKYDPISFVAKGANRNFLLEPLLAFRDEHYTVYFNIQE* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0332 776 Pfam Beta-L-arabinofuranosidase, GH127 106 233 IPR012878 -
Ahy18g0332 776 Pfam Beta-L-arabinofuranosidase, GH127 234 564 IPR012878 -
Ahy18g0332 776 PANTHER - 234 775 - -
Ahy18g0332 776 PANTHER - 7 233 - -
Ahy18g0332 776 Gene3D - 656 759 - -
Ahy18g0332 776 PANTHER PROLINE-TRNA LIGASE (DUF1680) 7 233 - -
Ahy18g0332 776 PANTHER PROLINE-TRNA LIGASE (DUF1680) 234 775 - -
Ahy18g0332 776 SUPERFAMILY AbfB domain 673 756 IPR036195 GO:0046373|GO:0046556
Ahy18g0332 776 Coils Coil 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0332 Ahy-Chr18 2803923 2807991 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0332 K09955 - nnu:104597433 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0332 18 2803923 2807991 Ahy18g0332 18 2803923 2807991 ECH
Ahy18g0332 18 2803923 2807991 Ahy8g1138 8 26582306 26586435 hybridization
Ahy18g0332 18 2803923 2807991 Ahy13g0567 13 5908170 5913738 PCT