Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1682 ATGGAATCCTCAATTGTGGTTGTTTGGTATCTATCTCTATTTCTAGCTATGAACACGGTTCTCCCTACATTGGCAAAAGTATACACCGTTGGAGAGTCCATAGGTTGGGCAATCGGAGCTGATTATAGTACTTGGGCTAGTGACAAGACCTTTCATGTTGGTGATAAACTTGTTTTCAACTATGGAGCTGGGCACACAGTAGACGAAGTTAAAGAAAATGACTACAAAAGCTGCACAACAGGCAATTCACTTACTTCAGACAGCAGTGGTGCCACCACAATTATTCTCAAGACTGCCGGCACACATTACTTCATATGCGCTGCGCCGGCGCACTGCATGGGCGGCATGCAACTTGCTGTCACGGTGAAGGCAGCTAAAAAGGCTGCCTCTCCGACACCGGCTCCAGCCCCAGCGCCATCAAAGGCAAAGGATTCATCTTCTGATACCAAAGGCACACCTAAGGCATCTACCACCCCCGCAACTGCTCCAACAAGAAGCACAACCAGCACACCAACCAAATCCGGCAGTTCAAAAGGGGATATTTCAATGGCTCCTAGTTTATTCTCACCGACTTTTGCGCTAGTGTTGATTGTTTCCTGGATCTCCTACTATGTTATGCTGCCTATGGTATGA 633 0.4739 MESSIVVVWYLSLFLAMNTVLPTLAKVYTVGESIGWAIGADYSTWASDKTFHVGDKLVFNYGAGHTVDEVKENDYKSCTTGNSLTSDSSGATTIILKTAGTHYFICAAPAHCMGGMQLAVTVKAAKKAASPTPAPAPAPSKAKDSSSDTKGTPKASTTPATAPTRSTTSTPTKSGSSKGDISMAPSLFSPTFALVLIVSWISYYVMLPMV* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1682 210 MobiDBLite consensus disorder prediction 129 180 - -
Ahy7g1682 210 ProSitePatterns Type-1 copper (blue) proteins signature. 100 116 IPR028871 -
Ahy7g1682 210 Gene3D - 24 128 IPR008972 -
Ahy7g1682 210 MobiDBLite consensus disorder prediction 142 180 - -
Ahy7g1682 210 ProSiteProfiles Phytocyanin domain profile. 26 124 IPR003245 GO:0009055
Ahy7g1682 210 PANTHER BLUE COPPER PROTEIN 12 144 IPR039391 GO:0009055
Ahy7g1682 210 CDD Phytocyanin 26 122 - -
Ahy7g1682 210 Pfam Plastocyanin-like domain 36 116 IPR003245 GO:0009055
Ahy7g1682 210 SUPERFAMILY Cupredoxins 25 122 IPR008972 -
Ahy7g1682 210 PANTHER BLUE COPPER PROTEIN-LIKE 12 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1682 Ahy-Chr7 60709087 60711217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g1682 17 122 Miscellaneous Gene Families AT1G22480 56.637 1.10e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1682 - - adu:107459191 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2984 17 130256660 130258288 Ahy7g1682 7 60709087 60711217 hybridization
Ahy7g1682 7 60709087 60711217 Ahy17g1823 17 49465158 49467206 PCT
Ahy7g1682 7 60709087 60711217 Ahy8g0689 8 13518629 13519825 PCT
Ahy17g1823 17 49465158 49467206 Ahy7g1682 7 60709087 60711217 PCT
Ahy8g0689 8 13518629 13519825 Ahy7g1682 7 60709087 60711217 PCT