Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1823 ATGGAATCGTCAATTGTTGTTGTTTTGTATCTAACTCTATTTCAAGCTATGAACACGGTTCTCCCTACATTGGCAAAAGTATACACCGTTGGAGAGTCCATAGGTTGGGCAATCGGAGCTGATTATAGTACTTGGGCTAGTGACAAGACCTTTCATGTTGGTGATAAACTTGTCTTCAACTATGGAGCTGGGCACACAGTAGACGAAGTTAAAGAAAATGACTACAAAAGCTGCACAACAGGCAATTCACTTACTACAGACAGCAGTGGTACCACCACAATTATTCTCAAGACTGCCGGCACACATTACTTCATATGCGCTGCGCCGGCGCACTGCATGGGCGGTATGCAACTTGCTGTCACGGTGAAGGCAGCTAAAAAGGCTGCCTCTCCGACACCGGCTCCAGCCCCAGCGCCATCAAAGGCAAAGGATTCATCTTCTGATACCAAAGGCACACCTAAGGCATCTACCACCCCCGGAACTGCTCCGACAAGAAGCACAACCACCACACCAACCAAATCCGACAATTCAAAAGGGGATAGTTCAATGGCTCCTAGTTTATTCTCACCGACTTTTGCACTAGTGTTGATTGTTTCTTGGATCTCCTACTATATTATGCTGCCTATGGTATGA 633 0.4645 MESSIVVVLYLTLFQAMNTVLPTLAKVYTVGESIGWAIGADYSTWASDKTFHVGDKLVFNYGAGHTVDEVKENDYKSCTTGNSLTTDSSGTTTIILKTAGTHYFICAAPAHCMGGMQLAVTVKAAKKAASPTPAPAPAPSKAKDSSSDTKGTPKASTTPGTAPTRSTTTTPTKSDNSKGDSSMAPSLFSPTFALVLIVSWISYYIMLPMV* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1823 210 Gene3D - 24 128 IPR008972 -
Ahy17g1823 210 ProSitePatterns Type-1 copper (blue) proteins signature. 100 116 IPR028871 -
Ahy17g1823 210 ProSiteProfiles Phytocyanin domain profile. 26 124 IPR003245 GO:0009055
Ahy17g1823 210 PANTHER BLUE COPPER PROTEIN-LIKE 12 144 - -
Ahy17g1823 210 CDD Phytocyanin 26 122 - -
Ahy17g1823 210 MobiDBLite consensus disorder prediction 129 183 - -
Ahy17g1823 210 MobiDBLite consensus disorder prediction 142 183 - -
Ahy17g1823 210 PANTHER BLUE COPPER PROTEIN 12 144 IPR039391 GO:0009055
Ahy17g1823 210 Pfam Plastocyanin-like domain 36 116 IPR003245 GO:0009055
Ahy17g1823 210 SUPERFAMILY Cupredoxins 25 122 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1823 Ahy-Chr17 49465158 49467206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1823 12 122 Miscellaneous Gene Families AT1G22480 56.757 5.11e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1823 - - adu:107459191 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1823 17 49465158 49467206 Ahy17g1823 17 49465158 49467206 ECH
Ahy17g1823 17 49465158 49467206 Ahy8g0689 8 13518629 13519825 hybridization
Ahy17g2984 17 130256660 130258288 Ahy17g1823 17 49465158 49467206 PCT
Ahy7g1682 7 60709087 60711217 Ahy17g1823 17 49465158 49467206 PCT
Ahy17g1823 17 49465158 49467206 Ahy17g2984 17 130256660 130258288 PCT
Ahy17g1823 17 49465158 49467206 Ahy7g1682 7 60709087 60711217 PCT