Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2984 ATGGTTTTCTCTAAAGCATTGGTTTTGGCACTCTTTCTAGCAATGAACATGGCCTTGCCAACCATTGCAACTGTTTACACTGTAGGAGATACCTCAGGTTGGGCCACTGGTGGTGATTATAGCACTTGGGCTAGTGGCAAGAACTTTGTAGTTGGTGATAGCCTTGTTTTTAACTACGGATCCGGGCACACGGTGGACGAGGTGAAAGAAAGCGACTACAAATCATGCAGCATAGGGAATTCCATTAGCACAGATAGCAGTGGCGCCACCACCATACCTCTCAAGACTTCAGGCACACATTACTTCATTTGTAGTGTTCCTGGACACTGTTCTAGTGGAATGAAGCTTGCAGTTACTGTCAAGGATGGAAAATCATCATCATCATCATCCACTACTCCTTCTTCTTCTTCTTCTTCTGGGAAGGGTTCACCACCTTCCTCAACAACAGCCACACCAAAAGCCAATGCATCTTCTTCAGTGAGTAGGGTCACTCCAATTGTTGTGTTGATTGTTTCTTTGATCTCATACTGTGTTTTGAATATGGTATGA 549 0.4426 MVFSKALVLALFLAMNMALPTIATVYTVGDTSGWATGGDYSTWASGKNFVVGDSLVFNYGSGHTVDEVKESDYKSCSIGNSISTDSSGATTIPLKTSGTHYFICSVPGHCSSGMKLAVTVKDGKSSSSSSTTPSSSSSSGKGSPPSSTTATPKANASSSVSRVTPIVVLIVSLISYCVLNMV* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2984 182 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
Ahy17g2984 182 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
Ahy17g2984 182 Gene3D - 22 127 IPR008972 -
Ahy17g2984 182 PANTHER BLUE COPPER PROTEIN 7 174 IPR039391 GO:0009055
Ahy17g2984 182 CDD Phytocyanin 24 120 - -
Ahy17g2984 182 PANTHER BLUE COPPER PROTEIN-LIKE 7 174 - -
Ahy17g2984 182 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
Ahy17g2984 182 MobiDBLite consensus disorder prediction 122 156 - -
Ahy17g2984 182 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2984 Ahy-Chr17 130256660 130258288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2984 31 126 Miscellaneous Gene Families AT1G22480 62.500 1.30e-36 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2984 - - gmx:100306522 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2984 17 130256660 130258288 Ahy17g2984 17 130256660 130258288 ECH
Ahy17g2984 17 130256660 130258288 Ahy7g1682 7 60709087 60711217 hybridization
Ahy17g2984 17 130256660 130258288 Ahy17g1823 17 49465158 49467206 PCT
Ahy17g2984 17 130256660 130258288 Ahy8g0689 8 13518629 13519825 PCT
Ahy17g1823 17 49465158 49467206 Ahy17g2984 17 130256660 130258288 PCT
Ahy8g0689 8 13518629 13519825 Ahy17g2984 17 130256660 130258288 PCT