Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g1625 ATGAGTGTGGATTTAAAGAAAACTACCTCTAATGGCCATGAGAAAATGTTAAGCTTAGAAGAGCAGCAGTCCCTGATCATGGAGGTCAGAAGGTTGATTGGACCACTGTCTGGTAAGGCATCTCTTTATTGTTCTGATGCATCCATTGCAAGGCATTTGAGGGCGCGGAATTGGAATGTCAAGAAGGCGGTTAAAATGTTGAAACAGACACTAAAATGGAGAGCAGAATACAAACCAGAAGAGATCCGATGGGAAGATGTTGCTCAGGAAGCGGATACTGGAAAGATCTACAGAACAGATTATGTTGACAAGCATGGGAGAACAGTCCTTGTCATGAGACCTAGTCGCCAGAACTCGAAGTCAATAAAAGGACAGGTTAAATATTTGGTATACTGCATGGAGAATGCTATTCTAAATCTTCCACCACAGCAGGAACAGATGGTCTGGCTAATTGACTTCCAGGGTTTCAATTTGTCACATATATCAGTCAGGGTGACCCGTGAAACTGCCCATGTATTGCAAGATCAGTATCCTGAACGTCTGGGTCTTGCAATACTGTACAATCCACCTAAGTTCTTTGAACCATTCTTCACGATGGTAAAGCCCCTATTGGAGCCTAAGACTTACAATAAAGTGAAGTTTGTTTACGCTGATGATAACAATACCAAGAAGATCATGGAGGATTTATTTGATTTGGACCAACTTGAATCTGCATTTGGCGGGAAGAATGACACAGGGTTTGACATAAACAGGTATGCGGAGAGGATGAAAGAGGACGACAAGAAGATTCCCTCTTTCTGGACAGGGGAGAACTCTCTATCATCAGTTCCAGTTGCTCCTCCATCGTTAGATTCAATTAAGTTAGATTCTGATTCTGACCCATCTGACTACGAGAAGAGAGAATCTTCCCCTGACTTAGACCCTGACCCTAGAATGGACACCGAGATCGTTAACCATAATGATGAGAATGTCTTGGTTAATCAAGAGTATGGAAACGCCAGAGTTGATACGCATTAA 1017 0.4248 MSVDLKKTTSNGHEKMLSLEEQQSLIMEVRRLIGPLSGKASLYCSDASIARHLRARNWNVKKAVKMLKQTLKWRAEYKPEEIRWEDVAQEADTGKIYRTDYVDKHGRTVLVMRPSRQNSKSIKGQVKYLVYCMENAILNLPPQQEQMVWLIDFQGFNLSHISVRVTRETAHVLQDQYPERLGLAILYNPPKFFEPFFTMVKPLLEPKTYNKVKFVYADDNNTKKIMEDLFDLDQLESAFGGKNDTGFDINRYAERMKEDDKKIPSFWTGENSLSSVPVAPPSLDSIKLDSDSDPSDYEKRESSPDLDPDPRMDTEIVNHNDENVLVNQEYGNARVDTH* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g1625 338 SMART CRAL_TRIO_N_2 45 70 IPR011074 -
Ahy7g1625 338 Gene3D - 3 270 IPR036865 -
Ahy7g1625 338 MobiDBLite consensus disorder prediction 320 338 - -
Ahy7g1625 338 PANTHER GH16843P 1 303 - -
Ahy7g1625 338 CDD SEC14 92 242 IPR001251 -
Ahy7g1625 338 SMART sec14_4 90 244 IPR001251 -
Ahy7g1625 338 SUPERFAMILY CRAL/TRIO N-terminal domain 20 86 IPR036273 -
Ahy7g1625 338 PANTHER CRAL-TRIO LIPID BINDING DOMAIN, CRAL/TRIO DOMAIN-CONTAINING PROTEIN-RELATED 1 303 - -
Ahy7g1625 338 Pfam CRAL/TRIO domain 94 241 IPR001251 -
Ahy7g1625 338 SUPERFAMILY CRAL/TRIO domain 84 262 IPR036865 -
Ahy7g1625 338 Pfam CRAL/TRIO, N-terminal domain 45 68 IPR011074 -
Ahy7g1625 338 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 84 247 IPR001251 -
Ahy7g1625 338 MobiDBLite consensus disorder prediction 289 318 - -
Ahy7g1625 338 MobiDBLite consensus disorder prediction 271 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g1625 Ahy-Chr7 56194976 56201941 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g1625 - - gmx:100780151 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2930 17 129151341 129154123 Ahy7g1625 7 56194976 56201941 hybridization
Ahy7g1625 7 56194976 56201941 Ahy17g1873 17 58839359 58846399 PCT
Ahy7g1625 7 56194976 56201941 Ahy8g0637 8 12546500 12549376 PCT
Ahy17g1873 17 58839359 58846399 Ahy7g1625 7 56194976 56201941 PCT
Ahy8g0637 8 12546500 12549376 Ahy7g1625 7 56194976 56201941 PCT