Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2930 ATGATGAGTGGTGTGAATCATAGAAACAGTAGTACCGTCTATAAAGGCCATGAGAAAATATTAATATCACAAGAAGAACAAGAAAAGATCAATGAGGTGAGAAGGTTGATAGGTCCATTATCAGCAAAGGCATCTGTTTATTGCAGTGATTTATCCATATCAAGGTATTTGAGATCCAAAAACTGGAATGTGAAGAAGGCAACACAAATGCTGCAGCGGAGCCTGAAATGGAGAGAAGAATACAAACCTGAAGAGATACGTTGGGAAGATGTTGCTAATGATGCAGAGACTGGGAAGATTTATATGCCAGGTTACTATGACAGGCATGGTAGGACAGTCCTAGTAATGAGGCCTAGTCGCCAGAGAAGCACAAATGATATAAAAGAACAGATTATGTATTTTGTATACTGCCTAGAGAATGCCATATTCAATCTTCCACCAAATCAAGAAGAGATAGTTTGGCTGGTTGATTTCCAGGGTTACACTTTGGCAAACCTTTCATTCAAGATCACACGTGAAACTGCTTTTATATTACAAGAATATTATCCAGAGCGCCTTGGTTTGGGATTTATGTATAATGCACCTAGGATCTTCCGGCCATTCTACGCGATGGTGAAGCCTCTGTTAGAGTCCAAGACTTACAACAGAATTAAGTTCGGTTACTCAAACGATCACAACACCAAGAAGATGATAGAGGATTTGTTCGATATGGATCAACTTGATTCTGCATTTGGTGGGAACAATGACACTGGATTTGATATAGTAAAATATGCTGAGAGAATGAAAGAGCAGGATAAGAAGGTTGCCTCTTTCTGGGCACTGGTAAAGACTCCATCATCATCAGTGTCACACAGTGCAAGTTCTTCAGACTCAACCAGTTTAGATCCAGATTCTGATGGTTCTAACACAGAGAATTGA 918 0.3965 MMSGVNHRNSSTVYKGHEKILISQEEQEKINEVRRLIGPLSAKASVYCSDLSISRYLRSKNWNVKKATQMLQRSLKWREEYKPEEIRWEDVANDAETGKIYMPGYYDRHGRTVLVMRPSRQRSTNDIKEQIMYFVYCLENAIFNLPPNQEEIVWLVDFQGYTLANLSFKITRETAFILQEYYPERLGLGFMYNAPRIFRPFYAMVKPLLESKTYNRIKFGYSNDHNTKKMIEDLFDMDQLDSAFGGNNDTGFDIVKYAERMKEQDKKVASFWALVKTPSSSVSHSASSSDSTSLDPDSDGSNTEN* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2930 305 SMART sec14_4 94 249 IPR001251 -
Ahy17g2930 305 Pfam CRAL/TRIO domain 96 246 IPR001251 -
Ahy17g2930 305 MobiDBLite consensus disorder prediction 277 305 - -
Ahy17g2930 305 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 88 252 IPR001251 -
Ahy17g2930 305 SUPERFAMILY CRAL/TRIO domain 88 267 IPR036865 -
Ahy17g2930 305 CDD SEC14 96 247 IPR001251 -
Ahy17g2930 305 Gene3D - 4 285 IPR036865 -
Ahy17g2930 305 SMART CRAL_TRIO_N_2 49 74 IPR011074 -
Ahy17g2930 305 PANTHER CRAL-TRIO LIPID BINDING DOMAIN, CRAL/TRIO DOMAIN-CONTAINING PROTEIN-RELATED 12 304 - -
Ahy17g2930 305 PANTHER GH16843P 12 304 - -
Ahy17g2930 305 SUPERFAMILY CRAL/TRIO N-terminal domain 23 90 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2930 Ahy-Chr17 129151341 129154123 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2930 - - gmx:100777106 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2930 17 129151341 129154123 Ahy7g1625 7 56194976 56201941 hybridization
Ahy17g2930 17 129151341 129154123 Ahy17g1873 17 58839359 58846399 PCT
Ahy17g2930 17 129151341 129154123 Ahy8g0637 8 12546500 12549376 PCT
Ahy17g1873 17 58839359 58846399 Ahy17g2930 17 129151341 129154123 PCT
Ahy8g0637 8 12546500 12549376 Ahy17g2930 17 129151341 129154123 PCT