Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0796 ATGGTTGATTTAGAGTGGAAATCAAAGATAGCAAGGTCCAAAATCAACGTGCATGATCCCAAGTCTCCAAAACTCGCCGTTTCAGACAAACCCGTCCTTCAGTCAAACCTACCCGCTTTGCAACTACCTCTTACACCAAACGACATCAAAACAGCGCCGTTTCCCCTTTGTGAAGCTTACGACAACTATCTCCGCCTCCCTCAGCTCCGAACACTCTGGGACTCAAACAACTTCCCAAACTGGGCCCATGAGCCCATCATGAAGCCCGCCCTCAACGGTCTCGAGATCACGTTCCGCTTCATCTCAACCGTTTTGTCGGACCCAAGGCCGTACGCGAACAAACGCGAGTGGGCCCGCAGGCTCGAGTCCTTGGCCAAGGCCCAGGTACAGCTCATCTCCACGCTCTGCAAAGACCAGGAAGAAAGCCCGGAGACATGTGGTGAAGTTCCGGTAAGGGACGTCAGCAGTAGCGGTTACAGAAGCTATAGCGAGGCTAGTTTGCTTCCAAGGCTCGCCACGTGGCACAGATCCAAAGATGTAGCTCAGAGGATCCTCGCCACCGTGGAAGCTGAGATGACGAGATGTTCGTACACTTTAGGCTTGGGCGAACCGAACCTCACCGGAAAACCGATCCTCCGTTACGACGCGGTTTGCATGCCAAACGAGCTTCACTCTCTCGAAACGACGCCATTTGACCACGTCGAGAACTTCGAGAATTTGAATCTCCACGCAACGCACCAGATTGTAGAGTCCTGGTCACGCGCCGCGCGCGTGCTGCTCGAGAGTGTTGCGGAGTCGGTCGAAGGAAGAAGGTTTGAGAAGGCGGCGAGGGAGTGCTACGCGGTGGAGCGGATCTGGAAGCTTCTATCGGAGATCGAGGACCTTCACTTATTGATGGATCCGAACGATTTCATGAAGCTGAAGAAGCAGATCGCGATTCGGGGTTTCGGCGATACCGCGGCGTTTTGCTTCCGATCGAAGGAGCTTGTGGAGGTGGCGAAGATTTGTAGGGAGATGAAGAGGATGATACCGGGGATATTGGAGGTGGAGGTTGATCCGAAGGGAGGGCCGGGTATGGTGGAGGCGGCGATGAGGATTTACGCGGAGAAGAAGGCGGAGGGTGTGGTTGAGGTGCTGCAAGCGATGCTGGGGATAGAGGCGGCGATGAAGAGATTCTTCTACGATTACAAGCAGGTTGTAGCGGCGGTGATGGGAAGCGGGGAGGCTGGCGGGAACCGAGTTGATTCAGGTGACTCGCTAAGTCAGATATTCTTGGAGCCAACGTATTTTCCGAGCCTCGATGCGGCAAAGACGTTCCTGGGATATTATTGGGATAATCACGAAAATACCCTTACTTGGCACTAA 1365 0.5407 MVDLEWKSKIARSKINVHDPKSPKLAVSDKPVLQSNLPALQLPLTPNDIKTAPFPLCEAYDNYLRLPQLRTLWDSNNFPNWAHEPIMKPALNGLEITFRFISTVLSDPRPYANKREWARRLESLAKAQVQLISTLCKDQEESPETCGEVPVRDVSSSGYRSYSEASLLPRLATWHRSKDVAQRILATVEAEMTRCSYTLGLGEPNLTGKPILRYDAVCMPNELHSLETTPFDHVENFENLNLHATHQIVESWSRAARVLLESVAESVEGRRFEKAARECYAVERIWKLLSEIEDLHLLMDPNDFMKLKKQIAIRGFGDTAAFCFRSKELVEVAKICREMKRMIPGILEVEVDPKGGPGMVEAAMRIYAEKKAEGVVEVLQAMLGIEAAMKRFFYDYKQVVAAVMGSGEAGGNRVDSGDSLSQIFLEPTYFPSLDAAKTFLGYYWDNHENTLTWH* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0796 454 Gene3D - 214 313 - -
Ahy7g0796 454 Pfam Hs1pro-1 protein C-terminus 192 446 IPR009743 -
Ahy7g0796 454 Pfam Hs1pro-1 N-terminus 1 189 IPR009869 GO:0006952
Ahy7g0796 454 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 214 440 IPR037217 GO:0019441|GO:0020037|GO:0046872
Ahy7g0796 454 PANTHER NEMATODE RESISTANCE HSPRO2-LIKE PROTEIN 1 450 - -
Ahy7g0796 454 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 450 IPR038759 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0796 Ahy-Chr7 10046729 10048363 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0796 - - adu:107490795 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0969 17 11969085 11970755 Ahy7g0796 7 10046729 10048363 hybridization
Ahy20g1451 20 37653622 37655402 Ahy7g0796 7 10046729 10048363 PCT
Ahy10g1067 10 25495012 25496792 Ahy7g0796 7 10046729 10048363 PCT
Ahy7g0796 7 10046729 10048363 Ahy20g1451 20 37653622 37655402 PCT
Ahy7g0796 7 10046729 10048363 Ahy10g1067 10 25495012 25496792 PCT