Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0969 ATGGTTGATTTAGAGTGGAAATCAAAGATGGCAAGGTCCAAAATCAACGTGCATGATCCCAAGTCTCCAAAACTCGCCGTTTCAGACAAACCCGTCCTTCAGCCAAACCTACCCGCTTTGCAACTACCTCTTACACCAAACGACATCAAAACAGCGTCGTTTCCCCTTTGTGAAGCTTACGACAACTATCTCCGCCTCCCTCAGCTCCGAACACTATGGGACTCAAACAACTTCCCCAGATGGGCCCATGAGCCCATCATGAAGCCCGCCCTCAACGGTCTCGAGATCACGTTCCGCTTCATCTCAACCGTTTTGTCGGACCCAAGGCCGTACGCGAACAAACGCGAGTGGGCCCGCAGGCTCGAGTCTTTGGCCAAGGCCCAGGTACAGCTCATCTCCACGCTCTGCAAAGACCAGGAAGAAAGCCCGGAGACATGTGGTGAAGTTCCGGTAAGGGACGTCAGCAGTAGCGGTTACAGAAGCTATAGCGAGGCTAGTTTGCTTCCAAGGCTCGCCACGTGGCACAGATCCAAAGATGTAGCTCAGAGGATCCTCGCCACCGTGGAAGCTGAGATGACGAGATGTTCGTACACTCTAGGCTTGGGCGAACCGAACCTCACCGGAAAACCGATCCTCCGTTACGACGCGGTTTGCATGCCAAACGAGCTTCACTCTCTCGAAACGACGCCATTTGACCACGTCGAGAACTTCGAGAATTTGAATCTCCACGCAACGCACCAGATTGTAGAGTCCTGGTCACGCGCCGCGCGCGTGCTGCTCGAGAGTGTTGCGGAGTCGGTGGAAGGAAGAAGGTTTGAGAAGGCGGCGAGGGAGTGCTACGCGGTGGAGCGGATCTGGAAGCTTCTATCGGAGATCGAGGACCTTCACTTATTGATGGATCCGAACGATTTCATGAAGCTGAAGAAGCAGATCGCGATTCGGGGTTTCGGCGATACGGCGGCGTTTTGCTTCCGATCGAAGGAGCTTGTGGAGGTGGCGAAGATTTGTAGGGAGATGAAGAGGATGGTACCGGGGATATTGGAGGTGGAGGTTGATCCGAAGGGAGGGCCGGGTATGGTGGAGGCGGCGATGAGGATTTACGCGGAGAAGAAGGCGGAGGGTGTGGTTGAGGTGCTGCAAGCGATGCTGGGGATAGAGGCGGCGATGAAGAGATTCTTCTACGATTACAAGCAGGTTGTAGCGGCGGTGATGGGAAGCGCGGAGGCTGGCGGGAACCGAGTTGATTCAGGTGACTCGCTAAGTCAGATATTCTTGGAGCCAACGTATTTTCCGAGCCTCGATGCGGCAAAGACGTTCCTGGGATATTATTGGGATAATCACGAAAATACCCTTACTTGGCACTAA 1365 0.5421 MVDLEWKSKMARSKINVHDPKSPKLAVSDKPVLQPNLPALQLPLTPNDIKTASFPLCEAYDNYLRLPQLRTLWDSNNFPRWAHEPIMKPALNGLEITFRFISTVLSDPRPYANKREWARRLESLAKAQVQLISTLCKDQEESPETCGEVPVRDVSSSGYRSYSEASLLPRLATWHRSKDVAQRILATVEAEMTRCSYTLGLGEPNLTGKPILRYDAVCMPNELHSLETTPFDHVENFENLNLHATHQIVESWSRAARVLLESVAESVEGRRFEKAARECYAVERIWKLLSEIEDLHLLMDPNDFMKLKKQIAIRGFGDTAAFCFRSKELVEVAKICREMKRMVPGILEVEVDPKGGPGMVEAAMRIYAEKKAEGVVEVLQAMLGIEAAMKRFFYDYKQVVAAVMGSAEAGGNRVDSGDSLSQIFLEPTYFPSLDAAKTFLGYYWDNHENTLTWH* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0969 454 Pfam Hs1pro-1 protein C-terminus 192 446 IPR009743 -
Ahy17g0969 454 PANTHER NEMATODE RESISTANCE HSPRO2-LIKE PROTEIN 1 450 - -
Ahy17g0969 454 Pfam Hs1pro-1 N-terminus 1 189 IPR009869 GO:0006952
Ahy17g0969 454 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 450 IPR038759 -
Ahy17g0969 454 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 214 440 IPR037217 GO:0019441|GO:0020037|GO:0046872
Ahy17g0969 454 Gene3D - 214 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0969 Ahy-Chr17 11969085 11970755 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0969 - - adu:107490795 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0969 17 11969085 11970755 Ahy17g0969 17 11969085 11970755 ECH
Ahy17g0969 17 11969085 11970755 Ahy7g0796 7 10046729 10048363 hybridization
Ahy20g1451 20 37653622 37655402 Ahy17g0969 17 11969085 11970755 PCT
Ahy10g1067 10 25495012 25496792 Ahy17g0969 17 11969085 11970755 PCT
Ahy17g0969 17 11969085 11970755 Ahy20g1451 20 37653622 37655402 PCT
Ahy17g0969 17 11969085 11970755 Ahy10g1067 10 25495012 25496792 PCT