Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1067 ATGGTTGATTTGCATTGGAAAACAAACATGGTCAACTCCGACATGTCATCAAATCCTCCAAAACTTTCGAACCCCTCACAGTCACCGCGCGGTCCCTCTCTGCATGTTCCCTTCCCCACCACAACAGACTTCTCCCCCGCACCTCCTCCGCTCTGTGCCGCCTACGACCACTACCTCCGCCTCCCGGACCTCCGAAAACTGTGGTCCCACAGAGACTTCCCAACCTGGAACAACGAGCCAATCCTAAAACCCGCTTTGCAAGCTCTTGAAATCTCGTTCCGGTTCCTCTCCACTGTGTCATCGGATCCAAGACCTTACGCGAACCGAAGAGAATGGAACCGTAAGATTGAGTCACTCGCCACGTGTCAGATCGAGATCATATCTATTCTCTGCGAGGACGAAGAGCAAGACACGGAAACACGTGGCACTGCACCAACCGCTAATCTCGCAGAATCCGGTAACAGAATTAGTTACAGCGAGTCCAGCCTGCTTCCGAGACTCGCCACGTGGCGGAGATCGAAGGACGCAGCTCAGAGGATCCTCCTCACCGTGGAGTGCCAGATGACAAGGTGTCCGTACACTTTGGGCCTAGGTGAGCCCAATCTCTCGGGAAAGCCCAGTCTCCTTTACGATGCGGTTTGCAGGCCCAGAGAACTCCACACGCTCCAGGCGACGCCGTTGGAGGGGAACTACGAGAACGTGAACGTTCATGCGGCGCACCAGATCTTGGAATCGTGGATCCGCGTAATGCAGAAGCTTCTAGAACGAATCGCTGGATCAATCGAAGGGAGGAAGTTCGAGAAGGCCGCGAGTGATCTCGACGCGGTGGAGCGGATCTGGAAGCTTCTGGAAGAAGTTATGGATGTTCACATGGCAATGGATCCTAACGATTTCTTGAAACTGATGAAGAGCCAGCTGGCAATGAGGTCGTTGAAAAACGGTTGCATAGGCGAAACGGTGCCGTTTTGTTTCCGGTCGAGGGAGTTGGTTGAGGTGGCGAGGATGTGTAAGGAGCTGAGGGAGAAGGTGCCGGAAGTAGTGGGAGCGGAGGTGGATCCAACGGGAGGGCCGAGGATTCAGGAGGCAGCGATGAGGCTTTACGCGGCGGCGGCGGAGGAGGAGAGGGAGAAGGTGGAGGTGCTGCAAGGGATGCAGGCGGTGGAGAAGGCTATGAAGGGGTTCTTTTATGGATACAAGCAGATGGTGGCGGCGGTTATGGGGAACGTGGAGGCGACTGGGAACCGAGTTGGGATGGGTTGCGAGGGTGGTGACTCACTGACTCAGATATTTATGGAGCCTACTTATTTTCCAAGCTTGGACGCTGCCAAAACTTTCTTAGGGTACTTTTGGGATAACAATACTAACAACAATAATAACGATCATGGTAAACGTGTTAATAGTTTTGTTGCTGATAGAAGGATTCGATGTTAG 1431 0.5346 MVDLHWKTNMVNSDMSSNPPKLSNPSQSPRGPSLHVPFPTTTDFSPAPPPLCAAYDHYLRLPDLRKLWSHRDFPTWNNEPILKPALQALEISFRFLSTVSSDPRPYANRREWNRKIESLATCQIEIISILCEDEEQDTETRGTAPTANLAESGNRISYSESSLLPRLATWRRSKDAAQRILLTVECQMTRCPYTLGLGEPNLSGKPSLLYDAVCRPRELHTLQATPLEGNYENVNVHAAHQILESWIRVMQKLLERIAGSIEGRKFEKAASDLDAVERIWKLLEEVMDVHMAMDPNDFLKLMKSQLAMRSLKNGCIGETVPFCFRSRELVEVARMCKELREKVPEVVGAEVDPTGGPRIQEAAMRLYAAAAEEEREKVEVLQGMQAVEKAMKGFFYGYKQMVAAVMGNVEATGNRVGMGCEGGDSLTQIFMEPTYFPSLDAAKTFLGYFWDNNTNNNNNDHGKRVNSFVADRRIRC* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1067 476 Pfam Hs1pro-1 protein C-terminus 188 452 IPR009743 -
Ahy10g1067 476 MobiDBLite consensus disorder prediction 9 38 - -
Ahy10g1067 476 MobiDBLite consensus disorder prediction 1 38 - -
Ahy10g1067 476 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 460 IPR038759 -
Ahy10g1067 476 Pfam Hs1pro-1 N-terminus 1 185 IPR009869 GO:0006952
Ahy10g1067 476 Gene3D - 208 310 - -
Ahy10g1067 476 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 210 446 IPR037217 GO:0019441|GO:0020037|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1067 Ahy-Chr10 25495012 25496792 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1067 - - gsj:114396435 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1451 20 37653622 37655402 Ahy10g1067 10 25495012 25496792 hybridization
Ahy10g1067 10 25495012 25496792 Ahy17g0969 17 11969085 11970755 PCT
Ahy10g1067 10 25495012 25496792 Ahy7g0796 7 10046729 10048363 PCT
Ahy17g0969 17 11969085 11970755 Ahy10g1067 10 25495012 25496792 PCT
Ahy7g0796 7 10046729 10048363 Ahy10g1067 10 25495012 25496792 PCT