Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0117 ATGAGGGAAAAAGAAGATGATGAAATTGTTGGTGCTCCTTTATTGTTTGAGACAAAAGAAGCAAGATTCAGAGGTGCTTACAAGTTGTTTGCATCAACAATATTGGTATCCATATCTTTGATTTTGTTCTACAGAGTAAAAAACTTCCCAACAGCAACAAGAACAGAATCATGGGCATGGATTGCTATGTTGGTGTCTGAGATTTTGTTTGGATTGTATTGGATCATCACTCAATCTGTTCGTTGGAGAATAGCTTTTCAATCTCCATCCAAACATACCCTTTTACAAAGATATGATGAAGAGAAGATGCCAGCGGTGGACATATTTGTGTGCACAGCTGATCCAAAATTAGAGCCACCATTAATGGTGATTAACACAATATTATCAGCAATGGCATACAATTATCCTTCAAATAAGTTGAGTGTGTATCTCTCTGATGATGGAGGATCAGAGTTAACATTCTATGCACTCTTCAAAGCTTCCATTTTCTCTAAACATTGGTTGCCATTCTGCCGAAAATTCAATCTTCAAACTAGGTCACCTCACGCTTATTTTTCCGCCCTAAATCATAATTATCATTGCCATCATCATGATCATGATGATGACTTTCATAAACAATGTTTATTTATCAAGAAATTATACGAAGAAATGAAAAGTGATATTGAAACAACATTAGCAAAGGGTAAGGTTGCACATAGTGAGAGGAATTTTCACAAAGGTTTCAAAGAATGGAGTTCGAAAACCAAAAAGCAGGACCACCATTCTATCGTGCAGATCATAATCGATGGAAGGGATAAAAATGCTGTAGATGAAGAGGGAATACAATTGCCAAGAGTTGTATACATGGCACGTGAGAAAAGACCCAATTACCCTCACCATTTCAAAGCAGGAGCTATGAATGCATTGATAAGAGTGTCATCGGAGATAAGCAATGGTCCCTTGATTCTGAACTTGGATTGTGACATGTACCCAAGTAACGCAGATACAATTCAAGAAACACTATGTTTCTTCATGGATGAATCCAGAGGCCAAAACATTGCTTATGTTCAATTCCCACAAAATTATAATAATCTCACCAACAATGATCTCTATGCCAGTTCTTGCCTTGCCACAGATATGATTGAGCTAGCTGGAATAAGTGGACATGGAGCTGCCCTGTATTGTGGAACAGGGTGCTTCCATAGAAGAGAAAGCCTCTCTGGAGCTCACTTTAAAGATTACAAAGCCAAATTGGATCATATCATGATCAACACCAAAATAGAAGATAATAGAACAGTTGATGAATTGAATGAAGCATCAAAACTTCTTGCTACTTGCTCCTATGAGCATGGCACCCTTTGGGGGAAGGAGATGGGATTGGTGTATGGGATTCCAGTGGAAGACATAGCAAGTGGGCTTGCAATAACTTGCAGGGGATGGAGATCAATATACTATAATCCAGAAAGGAAAGCATTCATTGGTGTAGCTCCAACAACCTTAGATGTTGCACTTGTTCAGCATAAGAGGTGGTCGGAGGGGATGTTCCAAATTTTCTTCTCAAAGTACTGTCCTTTCATTTATGGGCATGGCAAGATCAACATTGGTATTCAAATGGGTTATTGTGTCTACCTCTTATGGGCACCTTTGTCACTTCCTACTCTTTGTTATGCCATTCTTCCACCTCTTTGCTTCATTCGTGGAATACCATTGTTCCCACAGCCTACAAGCCTATGGTTCCTTCCCTTTGCATATGCATTTGTAGCCAACAATGGTTATAGCCTATGTGAGGCATTGATTTGTGGATCCACAATAAAGAGTTGGTTGAACTTGCAAAGAATGAGATTCATAAGGAGAACCACTTCCTATTTCTTTGGATTCATTGATACCATAACAAAGCAATTGGGACTATCACAAACAAATTTTGTAGTAACAGACAAGGTTGTCACCGAGGATGTTCAAAAGAGGTATGAGAAAGAAATCATTGACTTTGGAGGATGTTCATCAATCATGTTGACCATGATGGTAACATTGGCATTAGTAAACCTTCTTGGTCTTCTTGTGGGAATTAGGAGAATTATTATGGGACAATTGATTATGATTATTCAAATTGTGATTAGTGCAATGATTGTAATGGTGAATTTACCAGTTTATGAAGCTCTTTTCATCCGTAGTGATAAAGGTAGCATATCAAGCAATGTGATGATTAAGTCCTTTGTGTTGGCCTCATTGGCATGCTTCATTGCAACTTTTGTCTTCTAA 2238 0.3829 MREKEDDEIVGAPLLFETKEARFRGAYKLFASTILVSISLILFYRVKNFPTATRTESWAWIAMLVSEILFGLYWIITQSVRWRIAFQSPSKHTLLQRYDEEKMPAVDIFVCTADPKLEPPLMVINTILSAMAYNYPSNKLSVYLSDDGGSELTFYALFKASIFSKHWLPFCRKFNLQTRSPHAYFSALNHNYHCHHHDHDDDFHKQCLFIKKLYEEMKSDIETTLAKGKVAHSERNFHKGFKEWSSKTKKQDHHSIVQIIIDGRDKNAVDEEGIQLPRVVYMAREKRPNYPHHFKAGAMNALIRVSSEISNGPLILNLDCDMYPSNADTIQETLCFFMDESRGQNIAYVQFPQNYNNLTNNDLYASSCLATDMIELAGISGHGAALYCGTGCFHRRESLSGAHFKDYKAKLDHIMINTKIEDNRTVDELNEASKLLATCSYEHGTLWGKEMGLVYGIPVEDIASGLAITCRGWRSIYYNPERKAFIGVAPTTLDVALVQHKRWSEGMFQIFFSKYCPFIYGHGKINIGIQMGYCVYLLWAPLSLPTLCYAILPPLCFIRGIPLFPQPTSLWFLPFAYAFVANNGYSLCEALICGSTIKSWLNLQRMRFIRRTTSYFFGFIDTITKQLGLSQTNFVVTDKVVTEDVQKRYEKEIIDFGGCSSIMLTMMVTLALVNLLGLLVGIRRIIMGQLIMIIQIVISAMIVMVNLPVYEALFIRSDKGSISSNVMIKSFVLASLACFIATFVF* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0117 745 Pfam Cellulose synthase 106 416 IPR005150 GO:0016020|GO:0016760|GO:0030244
Ahy7g0117 745 Pfam Cellulose synthase 423 738 IPR005150 GO:0016020|GO:0016760|GO:0030244
Ahy7g0117 745 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 95 205 IPR029044 -
Ahy7g0117 745 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 244 425 IPR029044 -
Ahy7g0117 745 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN CSLE 12 740 - -
Ahy7g0117 745 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 12 740 - -
Ahy7g0117 745 SUPERFAMILY Nucleotide-diphospho-sugar transferases 258 515 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0117 Ahy-Chr7 828404 837261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0117 8 744 Glycosyltransferase AT1G55850 45.833 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy7g0117 - - ahf:112701815 1449.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0222 17 2133727 2154682 Ahy7g0117 7 828404 837261 hybridization
Ahy7g0117 7 828404 837261 Ahy17g0223 17 2156229 2161288 PCT
Ahy7g0117 7 828404 837261 Ahy7g0118 7 838712 844214 PCT