Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0223 ATGGTTGTAAAGAGGAGTGATGATGAAGAATCATTGTTTGAGACAACCAAATCAAGAGGGAGCTTCCTACATAGGCTCTTTTCACTGTCTTTGTTTGTTGCCATCTGCTTTGTCTATGCTTACCGGTTGACCCACATACCCACCGGAGGAGAAGACCACGGCGGCGGCGAAGATTACTACTATGGGACATGGACTTGGCTCGGGTTGCTTGCGGCGGAGCTGTGGTTCGGCCTCTACTGGGTCTTGGCTCAAGCCTTCCGGTGGAACTTAGTGTTTAGGAAAACCTTCAAGAACAGACTTTCTCAAAGATATGAAGAAAGCAAGTTACCAAAAGTGGACATATTTGTGTGCACAGCAGATCCAGATATTGAGCCACCAATAATGGTGATCAACACAGTCTTGTCTCTTATGGCTTATGACTATCCTTCTGAGAAGCTGAGTGTTTATCTCTCTGATGATGCTGCTTCTGATCTCACTTTCTATGCTCTTTTGGAGGCTTCTCTCTTTGCCAAGCATTGGTTACCTTTCTGCAAGAAATTCAATGTTCAACCTACCTCTCCAGCTGCTTATTTTAATAATATCCTTCTTCACCATAATCATGCTAAAGAATTCGCAAACATTAAGAAATTATACGATGAGATGAAAAAGAGAATTGAAGATGCAACTAAGTTGGGAAGAATAGCGAGTGAAGAACGCTCGAAGCATAAAGGATTTTCCCAGTGGGATTCATATTCTTCTCGACGTGACCATGACACAATTCTTCAAATAATACTGCATAAAAAAGAGCCTCATAATTCTAAAGATGAAGATGGGAATTATTTGCCAACTCTTGTGTATTTGGCTCGTGAGAAGAGACCCCAATATCATCACAATTTCAAAGCTGGAGCCATGAACTCCTTGCTAAGGGTGTCATCAGTGATTAGCAATGCAAAGATCATTCTAAATGTAGATTGTGATATGTACTCAAACAGTTCAGAATCAGTAAGGGATGCTCTTTGTTTTTTGATGGATGAAGAGAAAGGCCATGAAATTGCTTTTGTGCAGTTCCCTCAAAAATTTGACAACATTCTCAAGCATGACATATACAGCAGCACTCTATTAACATTAATTGATGTGGAGATGCATGGTGCGGATGGTTATGATGGCCCTTTGTACATCGGAACATGCTGTTTTCATAGAAGAGATGCTCTATGTGGGATGAAGTTCAGTGATAGATACAAGAATGACTTATTAAAGAGTGAGAGAGACAATTGCATAGGAGTAAACTTGAATGAATTAGAAGTAAAATCAAAGGCTCTAGCAAGTTGCACCTATGAAGAAAACACACTTTGGGGAAAAGAGATGGGTGTGATATATGGGTGTCTAGTGGAGGATGTGATGACAGGATTGTGTATACATTTACAAGGATGGAAATCAGTGTACTATAGCCCACCAAGGAAGGCTTTCTATGGTGTTGCTCCAACCACCTTGCTTCAAGCACTTGTTCAGCACAAGAGATGGGCTGAAGGAGAACTTCAAATTCTTCTTTCTAAGCATTGTCCAGCATTCTATGGCCATGGAAGGATCAACTTAGCCCTACAAATGGGATATTCTTACTACAATTGTTGGGCACTCACCTCCTTATCAAAGCTATGTTACTCCATCATCCCTTCACTCTATCTCCTTAGAGGCATTCCCTTGTTTCCAAAGATGTCTAGCATATGGTTCATACCTTTTGCATATGTAATAGTGGGTGAAAGTGCTCGCAGTTTGTTGGAGTTTGTGTTATTTGGAGGCACAATCCAAGGTTGGTGGAATGACTTAAGGATGGTGCTGTACAAGGGAACAAGCTCTTACCTATTTGCTCTCATAGACAACATCTCCAAGTTATTTGGCCTTCCAGATTCTCCCTTTACAGTCACAGCTAAGATCATGGAGGAAGATGTTTCCGAACGATACGAGAAACAAGTTATGGAGTTTGGAGCAGCTTCTCCATTGTTCACTGTATTGGCAACACTTGCATTGCTCAATTTGTTCTGTTTACTTGGCATCTTGAAGGAGTTAGCCCTTAGTGAAGACTGGTTTGAAACTTATAAGAAAATGTCATTGCAAATTCTGTTGTGTGGGTTCTTGGTACTTATCAATATTCCTATATACCAAGGACTTTTCTTAAGGAAGGATAAGGGCAGATTGCCAAGCTCTATTGCCATTAAATCAACAGTATTGGCTCTAAGTATATGCATCCTCTTCAGCATGTTGAAAGATAAATTGTTGTAA 2256 0.406 MVVKRSDDEESLFETTKSRGSFLHRLFSLSLFVAICFVYAYRLTHIPTGGEDHGGGEDYYYGTWTWLGLLAAELWFGLYWVLAQAFRWNLVFRKTFKNRLSQRYEESKLPKVDIFVCTADPDIEPPIMVINTVLSLMAYDYPSEKLSVYLSDDAASDLTFYALLEASLFAKHWLPFCKKFNVQPTSPAAYFNNILLHHNHAKEFANIKKLYDEMKKRIEDATKLGRIASEERSKHKGFSQWDSYSSRRDHDTILQIILHKKEPHNSKDEDGNYLPTLVYLAREKRPQYHHNFKAGAMNSLLRVSSVISNAKIILNVDCDMYSNSSESVRDALCFLMDEEKGHEIAFVQFPQKFDNILKHDIYSSTLLTLIDVEMHGADGYDGPLYIGTCCFHRRDALCGMKFSDRYKNDLLKSERDNCIGVNLNELEVKSKALASCTYEENTLWGKEMGVIYGCLVEDVMTGLCIHLQGWKSVYYSPPRKAFYGVAPTTLLQALVQHKRWAEGELQILLSKHCPAFYGHGRINLALQMGYSYYNCWALTSLSKLCYSIIPSLYLLRGIPLFPKMSSIWFIPFAYVIVGESARSLLEFVLFGGTIQGWWNDLRMVLYKGTSSYLFALIDNISKLFGLPDSPFTVTAKIMEEDVSERYEKQVMEFGAASPLFTVLATLALLNLFCLLGILKELALSEDWFETYKKMSLQILLCGFLVLINIPIYQGLFLRKDKGRLPSSIAIKSTVLALSICILFSMLKDKLL* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0223 751 SUPERFAMILY Nucleotide-diphospho-sugar transferases 122 512 IPR029044 -
Ahy17g0223 751 Coils Coil 204 224 - -
Ahy17g0223 751 Pfam Cellulose synthase 112 422 IPR005150 GO:0016020|GO:0016760|GO:0030244
Ahy17g0223 751 Pfam Cellulose synthase 433 747 IPR005150 GO:0016020|GO:0016760|GO:0030244
Ahy17g0223 751 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 9 742 - -
Ahy17g0223 751 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 248 407 IPR029044 -
Ahy17g0223 751 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 100 208 IPR029044 -
Ahy17g0223 751 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN E1 9 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0223 Ahy-Chr17 2156229 2161288 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0223 8 746 Glycosyltransferase AT1G55850 54.043 0.0 781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0223 - - gmx:100815825 1021.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0223 17 2156229 2161288 Ahy17g0223 17 2156229 2161288 ECH
Ahy17g0223 17 2156229 2161288 Ahy7g0118 7 838712 844214 hybridization
Ahy17g0222 17 2133727 2154682 Ahy17g0223 17 2156229 2161288 PCT
Ahy7g0117 7 828404 837261 Ahy17g0223 17 2156229 2161288 PCT
Ahy17g0223 17 2156229 2161288 Ahy17g0223 17 2156229 2161288 PCT
Ahy17g0223 17 2156229 2161288 Ahy7g0118 7 838712 844214 PCT
Ahy7g0118 7 838712 844214 Ahy17g0223 17 2156229 2161288 PCT