Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0222 ATGAGAGAAAAAGAAGATGATGAAATTATTGTTGGTGCTCCTTTATTGTTTGAGACAAAAGAAGCAAGATTCAGAGGTGCTTACAAGTTGTTTGCATCAACAATATTGGTATCCATATCTTTGATTTTGTTCTACAGAGTAACAAACTTCCCAACAGCAACAAGAACAGAATCATGGGCATGGATTGTTATGTTGGTGTCTGAGATTTTGTTTGGATTGTATTGGATCATCACTCAATCTGTTCGTTGGAGAATAGCTTTTCAATCTCCATCCAAACATACCCTTTTACAAAGATATGATGAAGAGAAAATGCCAGGGGTGGACATTTTTGTGTGCACAGCTGACCCAAAATTAGAGCCACCATTAATGGTGATTAACACAATATTATCAGCAATGGCATACAATTATCCTTCAAATAAGTTGAGTGTGTATCTCTCTGATGATGGAGGATCAGAGTTAACATTCTATGCACTCTTCAAAGCTTCCATTTTCTCAAAACATTGGTTGCCATTCTGCCGAAAATTCAATCTTCAAACTAGGTCACCTCACGCTTTTTTTTCGCCCCTAAATCATAATTATCATAGCCATCATCATGATCATGATGACTTTCACAAACAATGGTTATTTATCAAGAAATTATACGAAGAAATGAAAAGTGATATTGAAACAACATTAGCAAAGGGTAAGGTTGCAGATGGTGAGAGGAATTTTCACAAAGGTTTCAAAGAATGGAGTTCGAAAACCAAAAAGCAGGACCATCAGTCTATCGTGCAGATCATAATCGATGGAAGGGATAAAAATGCTGTAGATGAAGAGGGAATACAATTGCCAAGAGTTGTATACATGGCACGTGAGAAAAGACCCAATTACCCTCACCATTTCAAAGCAGGAGCTATGAATGCATTGATAAGAGTGTCATCGGAGATAAGCAATGGTCCCTTGATTCTGAACTTGGATTGTGACATGTACCCAAGTAACGCAGATACAATTCAAGAAACACTATGTTTCTTCATGGATGAATCCAGAGGCCAAAACATTGCTTATGTTCAATTCCCACAAAACTATAATAATCTCACCAACAATGATCACTATGCCAGTTCTTGCCTTGCCACAGATATGATTGAGCTGGCTGGAATAAGTGGACATGGAGCTGCCCTGTATTGTGGAACAGGGTGCTTCCATAGAAGAGAAAGCCTCTCTGGATCTCACTTTAGAGATTACAAAGCCAAATTGGATCATATGATTATGAACACCAAAATAGAAGATAATAGAACAGTTGATGAATTGAATGAAGCATCAAAACTTCTTGCTACTTGCACCTATGAGCATGGCACCCTTTGGGGGAAGGAGATGGGATTGGTGTATGGGATTCCAGTGGAAGACATAGCAAGTGGGCTTGCAATAACATGCAGGGGATGGAGATCAATATACTATAATCCAGAAAGGAAAGCATTCATTGGTGTAGCTCCAACAACCTTAGATGTTGCACTTGTTCAGCATAAGAGGTGGTCGGAGGGGATGTTCCAAATTTTCTTATCAAAGTACTGTCCTTTCATTTATGGGCATGGCAAGATCAACATTGGTATTCAAATGGGGTATTGTGTCTACCTCTTATGGGCACCTTTGTCACTTCCTACTCTTTCTTATGCCATTCTTCCTCCTCTTTGCTTGATTCGTGGAATACCATTATTCCCACAGCCTACAAGCCTTTGGTTCCTTCCCTTTGCATATGCATTTGTAGCCAACAATGTTTATAGCCTATGTGAGGCATTGAGTTGTGGATCCACAATAAAGAGTTGGTTGAACTTGCAAAGAATGAGATTCATAAGGAGAACCACTTCCTATTTCTTTGGATTCATTGATACCATAACAAAGCAATTGGGACTATCACAAACAAATTTTGTAGTAACAGACAAGGTTGTCACCGAGGATGTTCAAAAGAGGTATGAGAAAGAAATCATTGACTTTGGAGGATGTTCATCAATCATGTTGACCATGTTGGTAACATTGGCATTACTAAACCTTCTTGGTCTTCTTGTGGGAATTAGGAGAATTATTATGGGACAATTGATTATGATTATTCAAATTGTGATTAGTGCAATGATTGTAATGGTGAATTTACCAGTTTATGAAGCTCTTTTCATTCGTAGTGATAAAGGTAGCATATCAAGCAATGTGATGATTAAGTCCTTTGTGTTGGCCTCAATGGCATGCTTCATTGCAACTTTTGTCCTCTAA 2238 0.3834 MREKEDDEIIVGAPLLFETKEARFRGAYKLFASTILVSISLILFYRVTNFPTATRTESWAWIVMLVSEILFGLYWIITQSVRWRIAFQSPSKHTLLQRYDEEKMPGVDIFVCTADPKLEPPLMVINTILSAMAYNYPSNKLSVYLSDDGGSELTFYALFKASIFSKHWLPFCRKFNLQTRSPHAFFSPLNHNYHSHHHDHDDFHKQWLFIKKLYEEMKSDIETTLAKGKVADGERNFHKGFKEWSSKTKKQDHQSIVQIIIDGRDKNAVDEEGIQLPRVVYMAREKRPNYPHHFKAGAMNALIRVSSEISNGPLILNLDCDMYPSNADTIQETLCFFMDESRGQNIAYVQFPQNYNNLTNNDHYASSCLATDMIELAGISGHGAALYCGTGCFHRRESLSGSHFRDYKAKLDHMIMNTKIEDNRTVDELNEASKLLATCTYEHGTLWGKEMGLVYGIPVEDIASGLAITCRGWRSIYYNPERKAFIGVAPTTLDVALVQHKRWSEGMFQIFLSKYCPFIYGHGKINIGIQMGYCVYLLWAPLSLPTLSYAILPPLCLIRGIPLFPQPTSLWFLPFAYAFVANNVYSLCEALSCGSTIKSWLNLQRMRFIRRTTSYFFGFIDTITKQLGLSQTNFVVTDKVVTEDVQKRYEKEIIDFGGCSSIMLTMLVTLALLNLLGLLVGIRRIIMGQLIMIIQIVISAMIVMVNLPVYEALFIRSDKGSISSNVMIKSFVLASMACFIATFVL* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0222 745 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 96 203 IPR029044 -
Ahy17g0222 745 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 245 426 IPR029044 -
Ahy17g0222 745 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 13 740 - -
Ahy17g0222 745 Pfam Cellulose synthase 107 413 IPR005150 GO:0016020|GO:0016760|GO:0030244
Ahy17g0222 745 Pfam Cellulose synthase 423 738 IPR005150 GO:0016020|GO:0016760|GO:0030244
Ahy17g0222 745 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN CSLE 13 740 - -
Ahy17g0222 745 SUPERFAMILY Nucleotide-diphospho-sugar transferases 259 515 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0222 Ahy-Chr17 2133727 2154682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0222 12 744 Glycosyltransferase AT1G55850 46.351 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0222 - - ahf:112701815 1378.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0222 17 2133727 2154682 Ahy17g0222 17 2133727 2154682 ECH
Ahy17g0222 17 2133727 2154682 Ahy7g0117 7 828404 837261 hybridization
Ahy17g0222 17 2133727 2154682 Ahy17g0223 17 2156229 2161288 PCT
Ahy17g0222 17 2133727 2154682 Ahy7g0118 7 838712 844214 PCT