Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2510 ATGTCGTTTCGGAGATCCCTTGTGTTCTCCGCATCCTTCTTCTTCCTCCTCTTCCATGGCGCCTTCTCATTCTACCTCCCCGGCGTCGCACCTCAGGATTTCCAAAAGGGAGATCAATTACAAGTAAAAGTAAACAAATTAACATCAACGAAGACCCAGCTTCCCTACACATATTATTCCCTTCCATATTGTAAACCAGGCAAAATTCTAGATAGTGCTGAAAATCTTGGGGAAGTGCTTCGAGGTGATCGCATTGAAAATTCTCAGTATGTGTTTAAAATGCGTGAACCACAAATGTGCAATATTGTGTGTAAGCTGAAACTTGATGCCCAGAGTGCAAAAGAGTTCAAAGAGAAGATTGATGATGAGTACCGGGTGAACATGATCCTAGATAACCTTCCCTTGGTGGTTCCGATAAAACGTCCGGATCAGGACTCTACTGTTTATCAGCTTGGTTTCCATGTTGGACTCAAGGGGCAGTATAGTGGGAGCAAGGAAGAGAAGTATTTTATTCACAACCATTTGGCATTTACTGTCAAGTATCATAGAGATTTGCTAACCGAATCTGCTAGAATTGTGGGCTTTGAGGTGAAGCCATTCAGTGTTAAACATGAGTATGATGGGAATTGGGGTGAAAATACACGTTTGACAACTTGTGATCCTCATGCTAAGCACACAGTTGTCAACTCCAACACTCCTCAAGAGGTCGAAGAGAACAAGGAAATTATCTTCACATATGATGTTGAATTTGAGGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCCTATTTGCTAATGAATGATGACCAGATTCACTGGTTCTCAATTGTGAATTCATTGATGATTGTTCTCTTTCTCTCTGGAATGGTGGCAATGATAATGTTGCGTACACTCTATCGTGATATTTCAAAGTACAATGAGCTTGAGACCCAAGAAGAAGCGCAAGAAGAGACAGGCTGGAAGCTTGTCCATGGGGATGTTTTTAGGCCACCAAACAACTCAGATTTGCTGTGTGTTTACGTTGGAACAGGGGTTCAGTTTTTCTTTATGATACTAGTAACCATGATCTTTGCCGTCCTTGGATTCCTTTCTCCTTCTAACCGTGGTGGGCTTATGACAGCCATGCTGTTGCTTTGGGTATTCATGGGAATTTTTGCTGGTTATGCTTCTTCTCGCTTGTACAAAATGTTCAAAGGATCAGAGTGGAAGAGTATTGCCCTCAGGACTGCAACCTTGTTCCCTGCAACTGTCTGTGCTGTTTTCTTTGTGTTAAATGCTCTCATTTGGGGAGAAAAATCATCTGGAGCTGTGCCATTTGGAACAATGTTTGCTTTGATCTTTCTATGGTTCGGAATCTCTGTTCCACTTGTTTTTGTGGGTGGCTATGTTGGATTCAAGAAGCCTGCAATTGAGAACCCGGTAAAGACCAACAAAATCCCAAGGCAGATCCCAGAGCAAGCATGGTACATGAACCCGGTCTTCTCAGTTCTGATTGGAGGAATACTCCCATTTGGAGCTGTTTTCATTGAGCTTTTCTTCATCCTCACCTCAATCTGGCTGAACCAATTTTACTACATCTTTGGTTTCCTCTTCTTGGTCTTTGCCATCCTCATCGTCACTTGCGCCGAAATAACAATTGTGCTTTGCTACTTCCAGTTGTGCAGTGAGGATTATTTGTGGTGGTGGCGTTCATACCTCACCTCTGGCTCATCTGCACTCTACCTCTTCCTTTATGCAACGTTCTACTTCTTCACCAAGCTTGAAATCACCAAGTTCGTATCTGCTGTACTATACTTTGGCTACATGCTTATAGTATCTTATGCCTTTTTCGTGGTAACTGGTACCATCGGATTTTACGCATGCTTCTGGTTCACAAGGCTCATCTACTCTTCAGTCAAAATTGATTAG 1911 0.427 MSFRRSLVFSASFFFLLFHGAFSFYLPGVAPQDFQKGDQLQVKVNKLTSTKTQLPYTYYSLPYCKPGKILDSAENLGEVLRGDRIENSQYVFKMREPQMCNIVCKLKLDAQSAKEFKEKIDDEYRVNMILDNLPLVVPIKRPDQDSTVYQLGFHVGLKGQYSGSKEEKYFIHNHLAFTVKYHRDLLTESARIVGFEVKPFSVKHEYDGNWGENTRLTTCDPHAKHTVVNSNTPQEVEENKEIIFTYDVEFEESDVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPNNSDLLCVYVGTGVQFFFMILVTMIFAVLGFLSPSNRGGLMTAMLLLWVFMGIFAGYASSRLYKMFKGSEWKSIALRTATLFPATVCAVFFVLNALIWGEKSSGAVPFGTMFALIFLWFGISVPLVFVGGYVGFKKPAIENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFAILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKFVSAVLYFGYMLIVSYAFFVVTGTIGFYACFWFTRLIYSSVKID* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2510 636 Pfam Endomembrane protein 70 55 593 IPR004240 GO:0016021
Ahy6g2510 636 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 7 636 - -
Ahy6g2510 636 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 7 636 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2510 Ahy-Chr6 110108363 110112361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2510 11 636 Miscellaneous Gene Families AT5G10840 85.191 0.0 1099
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2510 K17086 - gmx:100810506 1170.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3210 16 148684376 148688408 Ahy6g2510 6 110108363 110112361 hybridization
Ahy6g2510 6 110108363 110112361 Ahy20g2090 20 117855617 117859499 PCT
Ahy6g2510 6 110108363 110112361 Ahy10g1642 10 95292342 95296254 PCT
Ahy20g2090 20 117855617 117859499 Ahy6g2510 6 110108363 110112361 PCT
Ahy10g1642 10 95292342 95296254 Ahy6g2510 6 110108363 110112361 PCT