Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3210 ATGTCGTTTCGGAGATCCCTTGTGTTCTCCGCATCCTTCTTCTTCCTCCTCTTCCATGGCGCCTTCTCATTCTACCTTCCCGGCGTCGCACCTCAGGATTTCCAAAAGGGAGATCAATTACAAGTAAAAGTAAACAAATTAACATCAACGAAGACCCAGCTTCCCTACACATATTATTCCCTTCCATATTGTAAACCAGGCAAAATTCTAGATAGTGCTGAAAATCTTGGGGAAGTGCTTCGAGGTGATCGCATTGAAAATTCTCAGTATGTGTTTAAAATGCGTGAACCACAAATGTGCAATATTGTGTGTAAGCTGAAACTTGATGCCCAGAGTGCAAAAGAGTTCAAAGAGAAGATTGATGATGAGTACCGGGTGAACATGATCCTAGATAACCTTCCCTTGGTGGTTCCGATAAAACGTCCAGATCAGGACTCTACTGTTTATCAGCTCGGTTTCCATGTTGGACTCAAAGGGCAGTATAGTGGGAGCAAGGAAGAGAAGTATTTTATTCACAACCATTTGGCATTTACTGTCAAGTATCATAGAGATTTGCTAACTGAATCTGCTAGAATTGTGGGCTTTGAGGTGAAGCCATTCAGTGTTAAACATGAGTATGATGGGAATTGGGGTGAAAATACACGTTTGACAACTTGTGATCCTCATGCTAAGCACACAGTTGTCAACTCCAACACTCCTCAAGAGGTCGAAGAGAACAAGGAAATTATCTTCACATTTGATGTTGAATTTGAGGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCCTATTTGCTAATGAATGATGACCAGATTCACTGGTTCTCAATTGTGAATTCATTGATGATTGTTCTCTTTCTCTCTGGAATGGTGGCAATGATAATGTTGCGTACACTCTATCGTGATATTTCAAAGTACAATGAGCTTGAGACCCAAGAAGAAGCGCAAGAAGAGACAGGCTGGAAGCTTGTCCATGGTGATGTTTTTAGGCCACCAAACAACTCAGATTTGCTGTGTGTTTACGTTGGAACAGGGGTTCAATTTTTCTTTATGATACTAGTAACCATGATCTTTGCCGTCCTTGGATTCCTTTCTCCTTCTAACCGTGGTGGGCTTATGACAGCCATGCTGTTGCTTTGGGTATTCATGGGAATTTTTGCTGGTTATGCTTCTTCTCGCTTGTACAAAATGTTCAAAGGATCAGAGTGGAAGAGTATTTCCCTCAGGACTGCAACCTTGTTCCCTGCAACTGTCTGTGCTGTTTTCTTTGTGTTAAATGCTCTCATTTGGGGAGAAAAATCATCTGGAGCTGTGCCATTTGGAACAATGTTTGCTTTGATCTTTCTATGGTTCGGAATCTCTGTTCCACTTGTTTTTGTGGGTGGCTATGTTGGATTCAAGAAGCCTGCAATTGAGAACCCGGTAAAGACCAACAAAATCCCAAGGCAGATCCCGGAGCAAGCATGGTACATGAACCCGGTCTTCTCAGTTCTGATTGGAGGAATACTCCCATTTGGAGCTGTTTTCATTGAGCTTTTCTTCATCCTCACCTCAATTTGGCTGAACCAATTTTACTACATCTTTGGTTTCCTCTTCTTGGTCTTCGCCATCCTCATCGTCACTTGTGCCGAAATAACAATTGTGCTTTGCTACTTCCAGTTGTGCAGTGAGGATTACTTGTGGTGGTGGCGTTCATACCTCACCTCTGGCTCATCTGCACTCTACCTCTTCCTTTATGCAACGTTCTACTTCTTCACCAAGCTTGAAATCACCAAGTTCGTATCTGCTGTACTATACTTTGGCTACATGCTTATAGTATCTTATGCCTTTTTCGTGGTAACTGGTACCATCGGATTTTACGCATGCTTCTGGTTCACAAGGCTCATCTACTCTTCAGTCAAAATTGATTAG 1911 0.4244 MSFRRSLVFSASFFFLLFHGAFSFYLPGVAPQDFQKGDQLQVKVNKLTSTKTQLPYTYYSLPYCKPGKILDSAENLGEVLRGDRIENSQYVFKMREPQMCNIVCKLKLDAQSAKEFKEKIDDEYRVNMILDNLPLVVPIKRPDQDSTVYQLGFHVGLKGQYSGSKEEKYFIHNHLAFTVKYHRDLLTESARIVGFEVKPFSVKHEYDGNWGENTRLTTCDPHAKHTVVNSNTPQEVEENKEIIFTFDVEFEESDVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPNNSDLLCVYVGTGVQFFFMILVTMIFAVLGFLSPSNRGGLMTAMLLLWVFMGIFAGYASSRLYKMFKGSEWKSISLRTATLFPATVCAVFFVLNALIWGEKSSGAVPFGTMFALIFLWFGISVPLVFVGGYVGFKKPAIENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFAILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKFVSAVLYFGYMLIVSYAFFVVTGTIGFYACFWFTRLIYSSVKID* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3210 636 Pfam Endomembrane protein 70 55 593 IPR004240 GO:0016021
Ahy16g3210 636 SUPERFAMILY MFS general substrate transporter 274 457 IPR036259 -
Ahy16g3210 636 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 7 636 - -
Ahy16g3210 636 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 7 636 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3210 Ahy-Chr16 148684376 148688408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3210 11 636 Miscellaneous Gene Families AT5G10840 84.873 0.0 1097
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3210 K17086 - gmx:100810506 1167.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3210 16 148684376 148688408 Ahy16g3210 16 148684376 148688408 ECH
Ahy16g3210 16 148684376 148688408 Ahy6g2510 6 110108363 110112361 hybridization
Ahy16g3210 16 148684376 148688408 Ahy20g2090 20 117855617 117859499 PCT
Ahy16g3210 16 148684376 148688408 Ahy10g1642 10 95292342 95296254 PCT
Ahy20g2090 20 117855617 117859499 Ahy16g3210 16 148684376 148688408 PCT
Ahy10g1642 10 95292342 95296254 Ahy16g3210 16 148684376 148688408 PCT