Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2090 ATGGCGTTTTTGAGATCTCAATCGCTCTCTGCGGTTGCTGTTCTTCTGCTACTCCTCATCCATGGAGCTCACTCCTTCTACCTCCCCGGCGTCGCCCCGCAGGATTTCCAGAAGGGAGATCAATTACAAGTGAAAGTAAACAAATTAACATCAACAAAGACCCAGCTTCCATACACATATTATTCACTTCCTTATTGTCGTCCAGAAAAAATACAGGATAGTGCTGAAAATCTCGGGGAAGTACTTCGTGGTGACCGCATTGAAAATTCTCTTTATGTGTTCAAAATGCGTGAACCACAAATGTGCAATGTTGTGTGTAATCTTAAACTCGATGCCAAAACTGCTAAGGAGTTCAAAGAGAAGATCAACGATGAGTATCGGGTGAACATGATCCTAGATAACCTTCCTCTAGTTGTTCCCATAAAAAGGACCGATCAGGAGGATTCTTATTTTTATCAGCTCGGTTACCATGTCGGACTCAAAGGGCTGTACAGCGGGGTTAAGGAGGAGAAATTTTTTATTCACAATCATTTGGCATTTACTGTTAAGTATCATAAAGATGCAGTGACGGAATCTGCTAGGATCGTGGGCTTTGAGGTTAAGCCATTCAGTATCAAACATGAATATGATGGTAAGTGGGATGAAAAGACTCGTCTAACAACCTGTGACCCCCATGCTAAACACACAGTTGTCAACTCCAACACTCCTCAAGAGGTTGAAGAAAACAAGGAGATTATCTTCACATATGACGTTGACTTCCAGGAAAGTGAGGTGAAGTGGGCTTCAAGATGGGATGCCTATTTGTTGATGAATGATGACCAAATTCACTGGTTCTCAATTGTTAACTCATTAATGATTGTTCTCTTCCTCTCGGGAATGGTAGCAATGATAATGCTGCGGACACTGTACCGTGACATTTCAAAGTACAATGAGCTTGAGACCCAAGAAGAAGCCCAAGAAGAGACTGGTTGGAAACTTGTCCATGGTGATGTGTTTAGGCCTCCTAACAACTCAGATTTGCTCTGTGTTTATGTTGGAACTGGTGTTCAGTTTTTTGGAATGATATTGGTAACCATGATATTTGCTGTGCTTGGGTTCCTTTCTCCTTCAAACCGAGGTGGCCTAATGACAGCCATGCTCTTGCTATGGGTTTTCATGGGAATTTTCGCTGGTTATGCTTCAACTCGCTTATACAAAATGTTCAAGGGAACGGAGTGGAAGAAAATGGCCCTCAGAACTGCAGTAGTGTTCCCTGGAATTGTATCTGCCGTTTTCTCTGTGTTAAATACTCTCATATGGGGCGAAAAATCATCTGGAGCTGTGCCATTTGGAACTATGTTTGCTCTGATCTTCTTATGGTTTGGGATTTCAGTTCCACTTGTTTTCGTTGGTAGTTATGTTGGGTTCAAGAAGCCAGCAATTGAAAATCCTGTGAAGACAAATAAAATCCCAAGGCAGATCCCTGAGCAGGCTTGGTACATGAACCCAGTCTTCTCGGTTTTGATTGGTGGAATACTCCCATTTGGAGCTGTTTTCATTGAACTTTTCTTCATCCTCACTTCAATCTGGTTGAATCAGTTTTACTACATCTTTGGATTCCTCTTTTTGGTCTTCATCATCCTGATCATCACTTGTGCCGAAATAACCATTGTTCTCTGCTACTTCCAGTTGTGCAGTGAGGATTACTTGTGGTGGTGGCGGTCATACCTCACCTCGGGTTCTTCCGCACTTTATCTCTTCCTCTATGCCACATTCTACTTCTTCACCAAGCTTGAGATCACAAAGTTGGTATCTGCAATATTATACTTTGGGTACATGCTCATAGCTTCTTATGCGTTCTTTGTGGTAACCGGTACTATAGGATTTTATGCTTGCTTTTGGTTCACTAGGCTCATCTACTCCTCAGTCAAAATTGATTAG 1920 0.4219 MAFLRSQSLSAVAVLLLLLIHGAHSFYLPGVAPQDFQKGDQLQVKVNKLTSTKTQLPYTYYSLPYCRPEKIQDSAENLGEVLRGDRIENSLYVFKMREPQMCNVVCNLKLDAKTAKEFKEKINDEYRVNMILDNLPLVVPIKRTDQEDSYFYQLGYHVGLKGLYSGVKEEKFFIHNHLAFTVKYHKDAVTESARIVGFEVKPFSIKHEYDGKWDEKTRLTTCDPHAKHTVVNSNTPQEVEENKEIIFTYDVDFQESEVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPNNSDLLCVYVGTGVQFFGMILVTMIFAVLGFLSPSNRGGLMTAMLLLWVFMGIFAGYASTRLYKMFKGTEWKKMALRTAVVFPGIVSAVFSVLNTLIWGEKSSGAVPFGTMFALIFLWFGISVPLVFVGSYVGFKKPAIENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFIILIITCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSAILYFGYMLIASYAFFVVTGTIGFYACFWFTRLIYSSVKID* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2090 639 Pfam Endomembrane protein 70 57 595 IPR004240 GO:0016021
Ahy20g2090 639 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 9 639 IPR004240 GO:0016021
Ahy20g2090 639 SUPERFAMILY MFS general substrate transporter 277 462 IPR036259 -
Ahy20g2090 639 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 9 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2090 Ahy-Chr20 117855617 117859499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2090 1 639 Miscellaneous Gene Families AT5G10840 84.056 0.0 1114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2090 K17086 - gmx:100780976 1154.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2090 20 117855617 117859499 Ahy20g2090 20 117855617 117859499 ECH
Ahy20g2090 20 117855617 117859499 Ahy10g1642 10 95292342 95296254 hybridization
Ahy16g3210 16 148684376 148688408 Ahy20g2090 20 117855617 117859499 PCT
Ahy6g2510 6 110108363 110112361 Ahy20g2090 20 117855617 117859499 PCT
Ahy20g2090 20 117855617 117859499 Ahy16g3210 16 148684376 148688408 PCT
Ahy20g2090 20 117855617 117859499 Ahy6g2510 6 110108363 110112361 PCT