Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2508 ATGAAGTTTATGAAGTTGGGATCAAAGCCTGATGCCCTTAAAGCTGATGGAAAATCTGTCAGGTATGTGTCATCTGAATTGGCTACAGATATCACAATCACTGTCGGTGAAGTTAAGTTTTGCCTTCACAAGTTCCCTCTACTCTCCAAGAGCAATCGATTACAGAGGTTAGTATCGAAGGTTGATGAAGAGAATTCTGATGACATATACTTGGATGACTTCCCTGGAGGACCGAAGGCCTTCGAAGTTTGCGCAAAATTCTGCTATGGAATGACAGTTACTCTAAATCCTTATAATGTAGTGGCTGTTCGTTGTGCTGCGGAGTTCCTTGAGATGACTGAAGATATCGATAAAGGAAACTTGATTTTCAAGATTGAGGTGTTTTTGAACTCTAGTATCTTTCGTAGCTGGAAAGATTCGATAATTGTTCTCCAAACAACAAAGGCTCTTCTTCCATGGTCTGAGGATCTGAAGATCATTGGGAGATGCATTGATTCCATTGCTTCAAAGACTTCAGTGGACCCAGGCAACATCACTTGGTCTTACACTTATAACCGGAAATTAACAGAACCTGATAATATTGTGGAGGAGACATCCCAAGAGAAAGTTAAGCATGTTCCAAGGGATTGGTGGGTTGAAGATATATGTGAATTGGACATTGATCTTTATAGAAGAGTGATGATTACAGTGAAATCAAAGGGAAGAATGGATGGTGTTGTGATTGGGGAGGCACTAAAAATCTATGCTATAAGATGGTTACCCGATTCTGTAGATGAATTGGTGTCTGGTGCCCACGCCCAGAGGTACAAAACCTTGGTAGAAACCATTGTGTGTCTGCTGCCGAGTGATAATGGCGTTGGTTGTTCCTGTAGCTTCTTGCTCAAGTTATTGAAAGTGGCAATACTAGTTGAAGCTGATGAGTCATCGAGAGAAGAGTTGATGAAGAGCATCAGCCTGAAATTACATGAAGCTTCTGTGAAAGACTTGTTGATTCCAGCAAGGTCTCCTCAAAGTACTATGTTTGATGTTGATTTGGTACAAGGTCTTTTGAATCGATACATGAGTGAAGAAAAGGACGGCCTTAATTTCGAAGCCAATGAGAAGAAAGATAAAGTAAATGATGAATCTCTTTTGAGGAGTATGTCCTTGTTGAATGTTGGCAAGTTGGTTGATGGTTATATCAGAGAAATTTCGCACGATCCGAATCTCAGCCTCACTAGTTTTATTGCTTTGTCTCAGTCAATTCCAAAGTCTGCTAGGCCAAATCATGATGGTTTGTACAGAGCTATTGACATCTACTTGAAGGAGCACCCTGGCCTGACAAAAGCTGAAAAAAGGAACATATGTGGACTCATGGATGTCAAAAAATTAACCATTGATGCGTCGACGCACGCCGCTCAAAATGATCGTCTTCCTCTCCGGGTTATAGTGCAGGTTCTCTATTTTGAGCAGGTCAAAGCTTCTGCCATCCCTCAATCCATTAATAACATTCCACACGGCCCTTCAAATGCCGACTCAAATGGAGACGATGAATGCAAACAAACTGAGGGTGAGAGCTGTCAATACCTTGACAACGAAGTATGTCACTTGAAAGAAGGAGAATTGTGCAAGAATGGAAAGTTGAACAAGAAGAATAGCAAGAACAGCCGGAGTGGCACGCAGTTGTTGCCTTCTCGGTCGAGGAGGATCTTCGATAAGTTGTGGAATGTGGGAAAAGGGCAGGCAGAGAATAGGAGTTCAGAGACTTCAGGGAGTTCTAATAGCCCAGCTTCAATAGTTCCTGGGGACACCAAGTCTTCTGGTTCATCTTTAAGACACCGGAGGCATTCTATATCTTAG 1839 0.4209 MKFMKLGSKPDALKADGKSVRYVSSELATDITITVGEVKFCLHKFPLLSKSNRLQRLVSKVDEENSDDIYLDDFPGGPKAFEVCAKFCYGMTVTLNPYNVVAVRCAAEFLEMTEDIDKGNLIFKIEVFLNSSIFRSWKDSIIVLQTTKALLPWSEDLKIIGRCIDSIASKTSVDPGNITWSYTYNRKLTEPDNIVEETSQEKVKHVPRDWWVEDICELDIDLYRRVMITVKSKGRMDGVVIGEALKIYAIRWLPDSVDELVSGAHAQRYKTLVETIVCLLPSDNGVGCSCSFLLKLLKVAILVEADESSREELMKSISLKLHEASVKDLLIPARSPQSTMFDVDLVQGLLNRYMSEEKDGLNFEANEKKDKVNDESLLRSMSLLNVGKLVDGYIREISHDPNLSLTSFIALSQSIPKSARPNHDGLYRAIDIYLKEHPGLTKAEKRNICGLMDVKKLTIDASTHAAQNDRLPLRVIVQVLYFEQVKASAIPQSINNIPHGPSNADSNGDDECKQTEGESCQYLDNEVCHLKEGELCKNGKLNKKNSKNSRSGTQLLPSRSRRIFDKLWNVGKGQAENRSSETSGSSNSPASIVPGDTKSSGSSLRHRRHSIS* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2508 612 SUPERFAMILY POZ domain 21 115 IPR011333 -
Ahy6g2508 612 SMART BTB_4 29 127 IPR000210 GO:0005515
Ahy6g2508 612 MobiDBLite consensus disorder prediction 539 558 - -
Ahy6g2508 612 PANTHER OS12G0117600 PROTEIN 4 600 IPR043454 -
Ahy6g2508 612 MobiDBLite consensus disorder prediction 573 600 - -
Ahy6g2508 612 Pfam NPH3 family 209 462 IPR027356 -
Ahy6g2508 612 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 4 600 IPR029961 GO:0060918|GO:0099402
Ahy6g2508 612 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Ahy6g2508 612 CDD BTB_POZ_NPY3-like 20 124 - -
Ahy6g2508 612 MobiDBLite consensus disorder prediction 569 612 - -
Ahy6g2508 612 MobiDBLite consensus disorder prediction 493 515 - -
Ahy6g2508 612 Gene3D Potassium Channel Kv1.1; Chain A 13 119 IPR011333 -
Ahy6g2508 612 Pfam BTB/POZ domain 25 117 IPR000210 GO:0005515
Ahy6g2508 612 ProSiteProfiles NPH3 domain profile. 209 486 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2508 Ahy-Chr6 110062815 110068749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2508 22 485 EF-hand Containing Proteins AT3G44820 34.280 5.50e-94 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2508 - - gmx:100809437 944.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3208 16 148637696 148643468 Ahy6g2508 6 110062815 110068749 hybridization
Ahy6g2508 6 110062815 110068749 Ahy20g2088 20 117721433 117725406 PCT
Ahy6g2508 6 110062815 110068749 Ahy10g1641 10 95248043 95251936 PCT
Ahy20g2088 20 117721433 117725406 Ahy6g2508 6 110062815 110068749 PCT
Ahy10g1641 10 95248043 95251936 Ahy6g2508 6 110062815 110068749 PCT