Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3208 ATGAAGTTTATGAAGTTGGGATCAAAGCCTGATGCCCTTAAAGCTGATGGAAAATCTGTCAGGTATGTGTCATCTGAATTGGCTACAGATATCACAATCACTGTAGGTGAAGTTAAGTTTTGCCTTCACAAGTTCCCTCTACTGTCCAAGAGCAATCGATTACAGAAGTTGGTATCGAAGGTTGATGAAGAGAATTCTGATGAAATATACTTGGATGACTTCCCTGGAGGACCGAAGGCCTTCGAAGTTTGCGCAAAATTCTGCTATGGAATGACAGTTACTCTAAATCCTTATAATGTAGTGGCTGCTCGTTGTGCTGCGGAGTTCCTTGAGATGACTGAAGATATCGATAAAGGAAACTTGATTTTCAAGATTGAGGTGTTTTTGAACTCTAGTATCTTTCGTAGCTGGAAAGATTCGATAATTGTTCTCCAAACAACAAAGGCTCTTCTTCCATGGTCTGAGGATCTGAAGATCATTGGGAGATGCATTGATTCCATTGCTTCAAAGACTTCAGTGGACCCAGGCAACATCACTTGGTCTTACACTTATAACCGGAAATTAACAGAACCGGATAATATTGTGGAGGAGACATCCCAAGAGAAAGTTAAGCATGTTCCAAGGGATTGGTGGGTTGAAGATATATGTGAATTGGACATTGATCTTTATAGAAGAGTGATGATTACAGTGAAATCAAAGGGAAGAATGGATGGTGTTGTGATTGGGGAGGCACTAAAAATCTATGCCATAAGATGGTTACCCGAGTCTGTAGATGAATTGGTGTCTGGTGCCCACGCCCAGAGGTACAAAACCTTGGTAGAAACCATTGTGTGTCTGCTGCCGAGTGATAATGGCGTTGGTTGTTCATGTAGCTTCTTGCTCAAGTTATTGAAAGTGGCAATACTAGTTGAAGCTGATGAGTCATCGAGAGAAGAGTTGATGAAGAGCATCAGCCTGAAATTACATGAAGCTTCTGTGAAAGACTTGTTGATTCCAGCAAGGTCTCCTCAAAGTACTATGTTTGATGTTGATTTAGTACAAGGTCTTTTGAATCGATACATGAGTGAAGAAAAGGACGGCCTTAATTTGGAAGCCAATGAGAAGAAAGATAAAGTAAATGATGAATCTCTTTTGAGGAGTATGTCCTTGTTGAATGTTGGCAAGTTGGTTGATGGTTATATCAGAGAAATTTCGCACGATCCGAATCTCAGCCTCGCTAGTTTTATTGCTTTGTTGCAGTCAATTCCAAAGTCTGCTAGGCCAAATCATGATGGTTTGTACAGAGCTATTGATATCTACTTGAAGGAGCACCCTGGTCTGACAAAAGCTGAAAAAAAGAACATATGTGGACTCATGGATGTCAAAAAATTAACCATTGATGCGTCGATGCACGCCGCTCAAAATGATCGTCTTCCTCTCCGAGTTATAGTGCAGGTTCTCTATTTTGAGCAGGTCAAAGCTTCTGCCATCCCTCAATCCATTAATAACGTTCCACACGGCCCTTCAAATGCTGACTCAAACGGAGACGACGAATGCAAACAAACTGAGGGTGAGAGCTGTCAATACCTTGACAACCAAGTATGTCACTTGAAAGAAGGAGAGTTGTGCAAGAATGGAAAGTTGAACAAGAAGAATAGCAAGAACAGCCGGAGTGGCACGCAGTTGTTGCCTTCTCGGTCGAGGAGGATCTTCGATAAGTTGTGGAATGTGGGAAAAGGGCAGGCAGAGAATAGGAGTTCAGAGACTTCAGGGAGTTCTAATAGCCCAGCTTCAATAGTTCCTGGGGACACCAAGTCTTCTGGTTCATCTTTAAGACATCGGAGGCATTCTATATCTTAG 1839 0.4198 MKFMKLGSKPDALKADGKSVRYVSSELATDITITVGEVKFCLHKFPLLSKSNRLQKLVSKVDEENSDEIYLDDFPGGPKAFEVCAKFCYGMTVTLNPYNVVAARCAAEFLEMTEDIDKGNLIFKIEVFLNSSIFRSWKDSIIVLQTTKALLPWSEDLKIIGRCIDSIASKTSVDPGNITWSYTYNRKLTEPDNIVEETSQEKVKHVPRDWWVEDICELDIDLYRRVMITVKSKGRMDGVVIGEALKIYAIRWLPESVDELVSGAHAQRYKTLVETIVCLLPSDNGVGCSCSFLLKLLKVAILVEADESSREELMKSISLKLHEASVKDLLIPARSPQSTMFDVDLVQGLLNRYMSEEKDGLNLEANEKKDKVNDESLLRSMSLLNVGKLVDGYIREISHDPNLSLASFIALLQSIPKSARPNHDGLYRAIDIYLKEHPGLTKAEKKNICGLMDVKKLTIDASMHAAQNDRLPLRVIVQVLYFEQVKASAIPQSINNVPHGPSNADSNGDDECKQTEGESCQYLDNQVCHLKEGELCKNGKLNKKNSKNSRSGTQLLPSRSRRIFDKLWNVGKGQAENRSSETSGSSNSPASIVPGDTKSSGSSLRHRRHSIS* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3208 612 Pfam NPH3 family 209 462 IPR027356 -
Ahy16g3208 612 PANTHER OS12G0117600 PROTEIN 4 600 IPR043454 -
Ahy16g3208 612 MobiDBLite consensus disorder prediction 539 558 - -
Ahy16g3208 612 ProSiteProfiles NPH3 domain profile. 209 486 IPR027356 -
Ahy16g3208 612 MobiDBLite consensus disorder prediction 573 600 - -
Ahy16g3208 612 MobiDBLite consensus disorder prediction 570 612 - -
Ahy16g3208 612 CDD BTB_POZ_NPY3-like 20 124 - -
Ahy16g3208 612 Gene3D Potassium Channel Kv1.1; Chain A 13 119 IPR011333 -
Ahy16g3208 612 Pfam BTB/POZ domain 25 117 IPR000210 GO:0005515
Ahy16g3208 612 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Ahy16g3208 612 MobiDBLite consensus disorder prediction 493 515 - -
Ahy16g3208 612 SMART BTB_4 29 127 IPR000210 GO:0005515
Ahy16g3208 612 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 4 600 IPR029961 GO:0060918|GO:0099402
Ahy16g3208 612 SUPERFAMILY POZ domain 21 115 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3208 Ahy-Chr16 148637696 148643468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3208 22 527 EF-hand Containing Proteins AT3G44820 32.778 7.05e-93 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3208 - - gmx:100809437 949.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3208 16 148637696 148643468 Ahy16g3208 16 148637696 148643468 ECH
Ahy16g3208 16 148637696 148643468 Ahy6g2508 6 110062815 110068749 hybridization
Ahy16g3208 16 148637696 148643468 Ahy20g2088 20 117721433 117725406 PCT
Ahy16g3208 16 148637696 148643468 Ahy10g1641 10 95248043 95251936 PCT
Ahy20g2088 20 117721433 117725406 Ahy16g3208 16 148637696 148643468 PCT
Ahy10g1641 10 95248043 95251936 Ahy16g3208 16 148637696 148643468 PCT