Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1641 ATGCATTCCACCTTCCTCGTCCACAAACCAACAACCACATTCAATTGGCAAATTGGCAATGCTACCCCAACACGCCACGCAACAATACTCCTTGTCTCCCCATTCTTGAAAAATATGAAGTTTATGAAGTTGGGTTCCAAGCCTGATTCCCTTGAAGCTCGTGGACACTCTACCAGATATGTATCATCTGAATTGGCCACTGATGTTACCATTAATGTCGGTGAAGTTAAGTTTTACCTTCATAAGTTTCCTCTATTGTCGAAGAGCAAGCGATTACAGAAGTTGATGTCGAAAGCTAGTGAAGAGGATTCTGATGATATTTACTTAGATGATTTCCCAGGAGGACCTAAGGCCTTTGAAATATGTGCAAAATTCTGTTATGAAATGACGGTTACTCTTAATGCTTACAATGTTGTAGCTGCTCGCTGTGCGGCCGAATATCTTGAGATGACTGAGGATATTGATCTGGGGAACTTAGTTTTTAAAATTGAAGTGTTCCTTAACTCAGGAATCTTCTGTTGCTGGAAGGATTCTATAATAGTCCTCCAAACTTGTAATTCTTTTCTGCCATGGTCTGAGGATCTGGAGATCATTGAGAGATGCATAGGTTCCATAACTTCTAAAATTGCTGTTGATCCGGCGAGCGTGTTCTGGTCTTACACTTATAATAGGAAATTAACAGAGAGAAAAAAACTTGTTGAGCACAAGATGATGTTTCTAGATCACATTGAATCTGTTCCTAAGGATTGGTGGGTTGAAGATATATGTGAACTGGACATTGATCTTTACAAAAGAGTAATGATTTGTGTGAAATCAAATGGAAGAACCGATAGCATTGTGATTGCAGAGGCACTAAAAGTGTATGCAATGAGATGGTTACCTGATTCCATTGATGCATTGACTTGGGAAGAGCATGCATCAAGAAACAAGTCTCTGGTAGAAACAGTTATCTGTTTATTGCCATGTGATAATGGCATTGGTTGCTCTTGTAGTTTTTTACTGAAGCTTCTGAAATTTGCCATATTAGTTGGAGCAAATGAGTCAGCAAGAGAAGAACTGATGAAGAAAATTAGCTCGAAATTGCATGAAGCTTGTGTCAAGGATTTGCTGATTCCAGCAAAGTCTCCTCAGATAACAACTTATGATGTTGATTTGGTACAAGGCCTTTTGAATCAATACTTGATTCACGAACAGGGAAGATGCAATATGGAGGTTATTGAGGAGAAAGATAATGGAAAAGATCTTTATATTTCGAGTGATAAATCCATATTGAACATTGGAAAGTTGGTCGACGGTTACCTCGGAGAAATTGCCCATGAGCCTAATCTCGGTCTCTCTAGTTTCGTCAATCTGTCGCAATCAGTTCCTGATTGTGCTAGGTCAAGTCACGATGGTCTATACAGAGCTATTGACATTTATTTGAAGAAGCATCCGGATTTGACAAAAGCAGAAAGGAAGAAGCTATGTAGACTCATGGATGTGAAGAAACTGACGGCGAATGCTTCAATGCATGCTGCGCAGAATGACCGGCTTCCTCTTCGAGTGATAGTGCAGGTTCTGTTTTTTGAGCAGGTTAGAGCCACAGCCAGAATTCAAGCAATACATGATCCTTTGCGGGTTGGAGGAGGTGAGAAGAGAGGGATTAATAGATGCCAGTCCCTCAAGGTGCCGATGATGAAAGAGGAAGGCAAGCTGAGTAAGAAGAACAGCAAAAACAGCCGAAGCGGCATGCAGTTGCTGCGGTCTGGGTCAAGGAGAATCATTGATAAGTTATGGATTGTGGGAAAAGGACAGCAAGAGAATAATAGGAGCTCTGAGACTTCAGGGAGTTTAGAGAATAATAGCCCAACTATGTCATCTGCTTTGAGACACCAGAGGCATTCTATCTCTTAG 1893 0.4089 MHSTFLVHKPTTTFNWQIGNATPTRHATILLVSPFLKNMKFMKLGSKPDSLEARGHSTRYVSSELATDVTINVGEVKFYLHKFPLLSKSKRLQKLMSKASEEDSDDIYLDDFPGGPKAFEICAKFCYEMTVTLNAYNVVAARCAAEYLEMTEDIDLGNLVFKIEVFLNSGIFCCWKDSIIVLQTCNSFLPWSEDLEIIERCIGSITSKIAVDPASVFWSYTYNRKLTERKKLVEHKMMFLDHIESVPKDWWVEDICELDIDLYKRVMICVKSNGRTDSIVIAEALKVYAMRWLPDSIDALTWEEHASRNKSLVETVICLLPCDNGIGCSCSFLLKLLKFAILVGANESAREELMKKISSKLHEACVKDLLIPAKSPQITTYDVDLVQGLLNQYLIHEQGRCNMEVIEEKDNGKDLYISSDKSILNIGKLVDGYLGEIAHEPNLGLSSFVNLSQSVPDCARSSHDGLYRAIDIYLKKHPDLTKAERKKLCRLMDVKKLTANASMHAAQNDRLPLRVIVQVLFFEQVRATARIQAIHDPLRVGGGEKRGINRCQSLKVPMMKEEGKLSKKNSKNSRSGMQLLRSGSRRIIDKLWIVGKGQQENNRSSETSGSLENNSPTMSSALRHQRHSIS* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1641 630 CDD BTB_POZ_NPY3-like 59 162 - -
Ahy10g1641 630 Pfam BTB/POZ domain 63 154 IPR000210 GO:0005515
Ahy10g1641 630 PANTHER OS12G0117600 PROTEIN 43 623 IPR043454 -
Ahy10g1641 630 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 43 623 IPR029961 GO:0060918|GO:0099402
Ahy10g1641 630 SMART BTB_4 67 165 IPR000210 GO:0005515
Ahy10g1641 630 ProSiteProfiles BTB domain profile. 67 135 IPR000210 GO:0005515
Ahy10g1641 630 ProSiteProfiles NPH3 domain profile. 249 526 IPR027356 -
Ahy10g1641 630 SUPERFAMILY POZ domain 56 153 IPR011333 -
Ahy10g1641 630 MobiDBLite consensus disorder prediction 598 630 - -
Ahy10g1641 630 Gene3D Potassium Channel Kv1.1; Chain A 40 162 IPR011333 -
Ahy10g1641 630 MobiDBLite consensus disorder prediction 561 580 - -
Ahy10g1641 630 Pfam NPH3 family 249 502 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1641 Ahy-Chr10 95248043 95251936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1641 60 525 EF-hand Containing Proteins AT3G44820 32.929 1.65e-85 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1641 - - aip:107620912 1169.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2088 20 117721433 117725406 Ahy10g1641 10 95248043 95251936 hybridization
Ahy16g3208 16 148637696 148643468 Ahy10g1641 10 95248043 95251936 PCT
Ahy6g2508 6 110062815 110068749 Ahy10g1641 10 95248043 95251936 PCT
Ahy10g1641 10 95248043 95251936 Ahy16g3208 16 148637696 148643468 PCT
Ahy10g1641 10 95248043 95251936 Ahy6g2508 6 110062815 110068749 PCT