Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2480 ATGTTATGCACTAAACTTCAATCGTCTCAACGGAAGAAAAAACCCGGTTTTCCAGTTTACCTTAATGTCTATGATCTTACGCCCATTAACGGTTATGCTTATTGGCTTGGCCTTGGAGTTTACCATTCTGGTGTTCAAGTTCATGGTGTTGAATATGGATTTGGAGCGCACGAACGAGACACGACGGGAATCTTTGAAGTGGAGCCAAGGCACTGCCCTGGATTCACTTTCAGGAAGTCGATCTTCATTGGAAACACAGACATGGGACCAAATGATGTGAGGTGTTTGATAGAGAAGCTAGCCCAAGAGTTTTCAGGGAACACCTATCATCTTATCCAGAAAAACTGCAACCACTTTTGCCAAGATCTTTCTCTCAAATTAACAGGACGCTCCATCCCTCGATGGATCAATCGTCTTGCTCGAATTGGTTTTCTCTGCAACTGTGTTCTGCCGCCAAGCCTAAACGACACAAGAATCAATCCGCAGGAAGAAAAGAAGAAAATGAGAACTCAATCCTGCAGGTTCGAGCCGGCTTTGTCCTCTCCTCCTTCGCTGTCTCGTGGCCATAGACATAGCCTTACTGCTCCTGGGTCTTTAGTCAACGATTCGCCGATGGCAACGGTTAAGGTAAAGTAA 636 0.4544 MLCTKLQSSQRKKKPGFPVYLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGFGAHERDTTGIFEVEPRHCPGFTFRKSIFIGNTDMGPNDVRCLIEKLAQEFSGNTYHLIQKNCNHFCQDLSLKLTGRSIPRWINRLARIGFLCNCVLPPSLNDTRINPQEEKKKMRTQSCRFEPALSSPPSLSRGHRHSLTAPGSLVNDSPMATVKVK* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2480 211 MobiDBLite consensus disorder prediction 159 211 - -
Ahy6g2480 211 Pfam PPPDE putative peptidase domain 18 151 IPR008580 GO:0008233
Ahy6g2480 211 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 9 209 - -
Ahy6g2480 211 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Ahy6g2480 211 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Ahy6g2480 211 PANTHER DESUMOYLATING ISOPEPTIDASE 9 209 IPR008580 GO:0008233
Ahy6g2480 211 Gene3D PPPDE domains 13 173 IPR042266 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2480 Ahy-Chr6 109631279 109633182 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2480 K22763 - gmx:100786432 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3175 16 148104172 148106219 Ahy6g2480 6 109631279 109633182 hybridization
Ahy6g2480 6 109631279 109633182 Ahy20g2062 20 116264560 116266547 PCT
Ahy6g2480 6 109631279 109633182 Ahy10g1619 10 93502431 93504372 PCT
Ahy20g2062 20 116264560 116266547 Ahy6g2480 6 109631279 109633182 PCT
Ahy10g1619 10 93502431 93504372 Ahy6g2480 6 109631279 109633182 PCT