Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3175 ATGTTGTGCACTAAACTTCAATCGTCTCAACGGAAGAAAAAACCCGGTTTTCCAGTTTACCTTAATGTCTATGATCTTACGCCCATTAACGGTTATGCTTATTGGCTTGGCCTTGGAGTTTACCATTCTGGTGTTCAAGTTCATGGTATTGAATATGGATTTGGAGCGCACGAACGAGACACGACGGGAATCTTTGAAGTGGAGCCTAGGCACTGTCCTGGATTCACTTTCAGGAAGTCAATTTTCATTGGAAACACAGACATGGGACCAAATGATGTGAGGTGTTTGATGGAGAAGCTAGCCCAAGAGTTTTCAGGGAACACCTATCATCTTATCCAGAAGAACTGCAACCACTTTTGCCAAGATCTTTGTCTCAAATTAACAGGACGCTCCATCCCTCGATGGATAAATCGTCTTGCTCGAATTGGTTTTCTCTGCAACTGTGTTCTGCCGCCAAGCCTAAACGACACAAGAATCAATCCGCAGGAAGCAGAAAAGAAGAAAATGAGAACTCAATCCTGCAGGTTTGAGCCGGCTTTGTCCTCTCCTCCTTCGGTGTCTCGTGGCCATAGACATAGCCTTACTGCTCCTGGGTCTTTAGTAAACGATTCGCCAATGGCAACGGTTAAGGTAAAGTAA 639 0.4476 MLCTKLQSSQRKKKPGFPVYLNVYDLTPINGYAYWLGLGVYHSGVQVHGIEYGFGAHERDTTGIFEVEPRHCPGFTFRKSIFIGNTDMGPNDVRCLMEKLAQEFSGNTYHLIQKNCNHFCQDLCLKLTGRSIPRWINRLARIGFLCNCVLPPSLNDTRINPQEAEKKKMRTQSCRFEPALSSPPSVSRGHRHSLTAPGSLVNDSPMATVKVK* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3175 212 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Ahy16g3175 212 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 9 210 - -
Ahy16g3175 212 MobiDBLite consensus disorder prediction 164 212 - -
Ahy16g3175 212 Pfam PPPDE putative peptidase domain 18 151 IPR008580 GO:0008233
Ahy16g3175 212 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Ahy16g3175 212 Gene3D PPPDE domains 13 173 IPR042266 -
Ahy16g3175 212 PANTHER DESUMOYLATING ISOPEPTIDASE 9 210 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3175 Ahy-Chr16 148104172 148106219 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3175 K22763 - gmx:100786432 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3175 16 148104172 148106219 Ahy6g2480 6 109631279 109633182 hybridization
Ahy16g3175 16 148104172 148106219 Ahy20g2062 20 116264560 116266547 PCT
Ahy16g3175 16 148104172 148106219 Ahy10g1619 10 93502431 93504372 PCT
Ahy20g2062 20 116264560 116266547 Ahy16g3175 16 148104172 148106219 PCT
Ahy10g1619 10 93502431 93504372 Ahy16g3175 16 148104172 148106219 PCT