Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2062 ATGCTGCGGAAACTGGTGACGGTGCCGGGGAAGAAGAAACCGGGCACAGTGCCGGTTTATCTGAACGTGTACGATCTGACTCCCATTAACGGCTATGCCTATTGGCTTGGCCTCGGTGTCTATCACTCTGGTGTTCAAGTTCATGGAATCGAATATGGTTTCGGTGCGCACGAGCACGATACGACGGGGATCTTCGAGGTTCAGCCACGGCACTGCCCTGGCTTCACTTTCAGGAAATCGATATTCATAGGAACAACGGATCTGGGCCCCAAAGATGTTAGGGCTTTCATGGAGAAGCTTGCTCACCACTACTCTGGCAACACCTACCACCTCATCTCCAAGAATTGCAACCACTTTTGCAACGATGTTTGCCTCAAGTTAACCGGAAAATCTATCCCTAGATGGGTTAATCGACTTGCTAGACTCGGTCTTCTCTGCAACTGTGTTCTTCCTCCGGGGCTTAACGACACCAAGGTTCGACAAGTTACATCAGAAAAGGTTCAGGAAGGAGAGAAGAAGAAGATGAGGAGTCAATCAAGCAGGTACGAGGGTTCCTCCAATCCTCCATCAGTGCCGCGAGGTTCGGCGATTAAAAGTAGTAGCCAAAGACATTGCCTTCCACCATCTTCGTCCCTGATTAGTGCTCCTTCAGGTTCAACCTTAACAGTAAAGTAA 675 0.4948 MLRKLVTVPGKKKPGTVPVYLNVYDLTPINGYAYWLGLGVYHSGVQVHGIEYGFGAHEHDTTGIFEVQPRHCPGFTFRKSIFIGTTDLGPKDVRAFMEKLAHHYSGNTYHLISKNCNHFCNDVCLKLTGKSIPRWVNRLARLGLLCNCVLPPGLNDTKVRQVTSEKVQEGEKKKMRSQSSRYEGSSNPPSVPRGSAIKSSSQRHCLPPSSSLISAPSGSTLTVK* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2062 224 MobiDBLite consensus disorder prediction 164 224 - -
Ahy20g2062 224 MobiDBLite consensus disorder prediction 180 224 - -
Ahy20g2062 224 Gene3D PPPDE domains 12 174 IPR042266 -
Ahy20g2062 224 MobiDBLite consensus disorder prediction 164 179 - -
Ahy20g2062 224 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 2 222 - -
Ahy20g2062 224 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Ahy20g2062 224 Pfam PPPDE putative peptidase domain 18 150 IPR008580 GO:0008233
Ahy20g2062 224 PANTHER DESUMOYLATING ISOPEPTIDASE 2 222 IPR008580 GO:0008233
Ahy20g2062 224 SMART DUF862_2a 17 155 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2062 Ahy-Chr20 116264560 116266547 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2062 K22763 - gmx:100306675 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2062 20 116264560 116266547 Ahy20g2062 20 116264560 116266547 ECH
Ahy20g2062 20 116264560 116266547 Ahy10g1619 10 93502431 93504372 hybridization
Ahy16g3175 16 148104172 148106219 Ahy20g2062 20 116264560 116266547 PCT
Ahy6g2480 6 109631279 109633182 Ahy20g2062 20 116264560 116266547 PCT
Ahy20g2062 20 116264560 116266547 Ahy16g3175 16 148104172 148106219 PCT
Ahy20g2062 20 116264560 116266547 Ahy6g2480 6 109631279 109633182 PCT