Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2478 ATGTCCTTCCTTTCATGCTTCCACCTCTCAAAAACTTCCGACGACTGTCCGCCGCATCCACCGCTGCGGCCGCAACACTTCTTGACAACACAAACCAGCTACACATACCAAACCGCCGCCGGCACCGTCACCGTGACATGGTCTCAGTCCATCTTCGGCCGGTCCCTCCAGCTCCATCTCCACAACCACCACCCTTTCAACCCTCCCACCTTCAACCTCCGCATCAACGCTTTCCCTTTCTCCTTCCGCAACAAGAAGCGCGGGCACAAATCTCTCTCTCACAACATAAGAATCTTCTGGAACCTCTCCAAAGCCAGGTTCGGTAACCGTCCGGAGCCTGAGTCTAATTACCTCCTTGCCCTCACGCTAGACGACTCCATCGCACTCCTCGTCGGAGATGTACCGCTCAAAGATGCATGCGCCACGTGCAAGGCACGTGATCCCAAGAACCGCCAGGTACTCGTCACCAGGAAAGAGTACGTCGACGTCCACGCCAACGGTGTCTCCAACAGAATCTACTCCACGTCAGCAACGATCGCAGGAAGAACGAGAGAGTTGGAGGTTGAATATCACGGCGGCGGCGGCGACGATAGCGAAAACTCGAGGCTTCTGTTTAGTTTCGACGGAGAGAAGGTTTTGGAAGTGAAGAGGTTGAGGTGGAAGTTTCGGGGGAATGAGAGAGTGGAAATTGGTGAAGGTGGTCACGTGCAAATCACGTGGGACGTTCATAACTGGCTATTCAAAAAGGAGGAATACCAACACTACTACAACAACTATAACAACTCCTACAATAATAAGAATAACAATCTGGGTAAAAGTGACGATGGTCACGCCGTGTTTATGTTCAAGTTCGAGGAGGACGAGGATTTTGGGGAGACTTATTGGAACGATTCGGAATGCGGAAAAACTGGCAAGAGTTTATTATTGTCATCGTCGTCGTTTTCGATGTCGTCTTCGCTGGGATCATTCGGCGGAAGCTCCTCCGTGATGGAGTGGTCCAATCTTGAAGAGAGCGAGTTGATTGGTCCCGTTGGATTAACTCTTCTTGTTCATGCTTGGAGAATTGGAATTTGA 1074 0.5102 MSFLSCFHLSKTSDDCPPHPPLRPQHFLTTQTSYTYQTAAGTVTVTWSQSIFGRSLQLHLHNHHPFNPPTFNLRINAFPFSFRNKKRGHKSLSHNIRIFWNLSKARFGNRPEPESNYLLALTLDDSIALLVGDVPLKDACATCKARDPKNRQVLVTRKEYVDVHANGVSNRIYSTSATIAGRTRELEVEYHGGGGDDSENSRLLFSFDGEKVLEVKRLRWKFRGNERVEIGEGGHVQITWDVHNWLFKKEEYQHYYNNYNNSYNNKNNNLGKSDDGHAVFMFKFEEDEDFGETYWNDSECGKTGKSLLLSSSSFSMSSSLGSFGGSSSVMEWSNLEESELIGPVGLTLLVHAWRIGI* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2478 357 Pfam Plant protein of unknown function (DUF868) 35 354 IPR008586 -
Ahy6g2478 357 PANTHER EXPRESSED PROTEIN 2 354 IPR008586 -
Ahy6g2478 357 PANTHER OS08G0422401 PROTEIN 2 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2478 Ahy-Chr6 109613720 109615252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2478 43 332 EF-hand Containing Proteins AT5G28150 28.082 3.01e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2478 - - aip:107605403 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3174 16 148096579 148098169 Ahy6g2478 6 109613720 109615252 hybridization
Ahy6g2478 6 109613720 109615252 Ahy20g2060 20 116245433 116246865 PCT
Ahy6g2478 6 109613720 109615252 Ahy10g1614 10 93405048 93406867 PCT
Ahy20g2060 20 116245433 116246865 Ahy6g2478 6 109613720 109615252 PCT
Ahy10g1614 10 93405048 93406867 Ahy6g2478 6 109613720 109615252 PCT