Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2060 ATGTCATCACCATTCCCTTCCTGCTTTCGGCCATCCCACACCCGCCGTAATTGTCCTCCACCACCGGCGCCACCAGGCTCCTCCAACCCCAACCTGACCACATACCTGTACCACACCGACACGGGCCTCGTGACTCTAACATGGTCACGCTCTATCTTAGGCCGCTCTCTCCACGTCCACGTCCACAACCACAACCCCTTCGATTCCCCTTCTTCTTCTTCTCCTTCTTCCTCCTCCTTTCAACTTCACATAAAGCCCTTCATATTCTGGAAGAAGCACGGATCCAAAACCCTCTCTTCCACCACGCGACTCTTCTGGAACCTCTCCAAGGCCAAGTTCTCTTCCTCCTTCTCCCCCGAACCCCACTCCTCCTTCTACCTTGCTCTCGTCGTCCACAACCGCATCGTTCTCCTCCTCGGCGATTCCCCCAAAGACGCCTACTCCAAGTCCAAGGCTCTCCACGCTAACAACCCCCACTCCCTCCTCCTCAAGAAGGAACACGTCTTTGCCGACACCGTTTACTCCACCACCGCCATTTTCGGCGGCAAGACCCGCCGTATTCAAATCGACTGCGGCTCCTCCAGGGATAACGACTCTGCCTCCTCCAAGCTCTCTTTCTCCGTCGACGGCGACAGGGTGCTGCAGGTAAAGCGCCTCAAGTGGAAGTTCAGGGGCAATGAGAGAGTTGAAATCGACGGCGTTCCGGTTCAGATCTCGTGGGACGTGTACAACTGGCTCTTCGACAAGGATAGTAATGGCGATGGGCACGCCATTTTCATGTTCAAGTTCGAGGCGGATGAACATGGCGTGGACAGGAACGTCGTGAATCCATGGGCGCAGCAGAACTGGAACTTGGGTTTGAGTGGCTCCTGCGACTGGGCCAAGATGTCATCTTCTTCCGTGTCGGTGGGTTCCTCCGCCGGGTCATTCGGCGGAAGCTCCTCCGTGTTGGAATGGTCCAGTGTGGAGGAGAACGAGTTGGTGGATCCCGTTGGCTTCTCTCTCATTGTTTATGCATGGAAGCGCTGA 1029 0.5607 MSSPFPSCFRPSHTRRNCPPPPAPPGSSNPNLTTYLYHTDTGLVTLTWSRSILGRSLHVHVHNHNPFDSPSSSSPSSSSFQLHIKPFIFWKKHGSKTLSSTTRLFWNLSKAKFSSSFSPEPHSSFYLALVVHNRIVLLLGDSPKDAYSKSKALHANNPHSLLLKKEHVFADTVYSTTAIFGGKTRRIQIDCGSSRDNDSASSKLSFSVDGDRVLQVKRLKWKFRGNERVEIDGVPVQISWDVYNWLFDKDSNGDGHAIFMFKFEADEHGVDRNVVNPWAQQNWNLGLSGSCDWAKMSSSSVSVGSSAGSFGGSSSVLEWSSVEENELVDPVGFSLIVYAWKR* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2060 342 PANTHER OS08G0422401 PROTEIN 2 341 - -
Ahy20g2060 342 PANTHER EXPRESSED PROTEIN 2 341 IPR008586 -
Ahy20g2060 342 MobiDBLite consensus disorder prediction 1 31 - -
Ahy20g2060 342 Pfam Plant protein of unknown function (DUF868) 29 341 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2060 Ahy-Chr20 116245433 116246865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2060 5 262 EF-hand Containing Proteins AT5G28150 36.704 4.22e-48 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2060 - - cam:101507611 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2060 20 116245433 116246865 Ahy20g2060 20 116245433 116246865 ECH
Ahy20g2060 20 116245433 116246865 Ahy10g1614 10 93405048 93406867 hybridization
Ahy16g3174 16 148096579 148098169 Ahy20g2060 20 116245433 116246865 PCT
Ahy6g2478 6 109613720 109615252 Ahy20g2060 20 116245433 116246865 PCT
Ahy20g2060 20 116245433 116246865 Ahy16g3174 16 148096579 148098169 PCT
Ahy20g2060 20 116245433 116246865 Ahy6g2478 6 109613720 109615252 PCT