Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3174 ATGTCCTTCCTTTCATGCTTCCACCTCTCAAAAACTTCCGACGACTGTCCGCCGCATCCACCGCTGCGGCAGCAACTCTTCTTGACAACGCAAACCAGCTACACATACCAAACCGCCGCCGGCACCGTCACCGTGACATGGTCTCAGTCCATCTTCGGCCGGTCCCTCCAGCTCCATCTCCACAACCACCACCCTTTCAACCCTCCCACCTTCAACCTCCGCATCAACGCTTTCCCTTTCTCCTTCCGCAACAAGAAGCGCGGGCACAAATCTCTCTCTCACAACATAAGAATCTTCTGGAACCTCTCCAAAGCCAGGTTCGGTAACCGTCCGGAGCCTGAGTCTAATTACCTCCTTGCCCTCACGCTAGACGACTCCATCGCACTCCTCGTCGGAGATGTACCGCTCAAAGATGCATGCGCCACGTGCAAGGCACGTGATCCCGAGAACCGCCAGGTACTCGTCACCAGGAAAGAGTACGTCGACGTCGACGCCAACGGTGTCTCCAACAGAGTCTACTCCACGTCGGCAACGATCGCCGGAAGAACGAGAGAGTTGGAGGTTGAATATCACGGCGGCGGCGGCGACGATAGCGAAAACTCGAGGCTTCTGTTTAGTTTCGACGGAGAGAAGGTTTTGGAAGTGAAGAGGTTGAGGTGGAAGTTTAGGGGGAACGAGAGAGTGGAAATTGGTGAAGGTGGTCACGTGCAAATCACGTGGGACGTTCATAACTGGCTATTCAAAAAGGAGGAATACCAACACTACTACAACAACTATAACAACTCCTACAATAATAAGAATAAGAATTATTATTATAACAATCTGGGTAAAAGTGATGATGGTCACGCCGTGTTTATGTTCAAGTTTGAGGAGGACGAGGATTTCGGGGAGACTTATTGGAACGATTCGGAATGCGGGAAAACTGGCAAGAGTTTATTATTGTCATCGTCGTCGTTTTCGTTGTCGTCTTCGCTGGGATCATTCGGCGGAAGCTCCTCCGTCATGGAGTGGTCCAATCTAGAAGAGAGCGAGTTGATTGGTCCCGTTGGATTAACTCTTCTTGTTCATGCTTGGAGAATTGGAATTTGA 1089 0.5078 MSFLSCFHLSKTSDDCPPHPPLRQQLFLTTQTSYTYQTAAGTVTVTWSQSIFGRSLQLHLHNHHPFNPPTFNLRINAFPFSFRNKKRGHKSLSHNIRIFWNLSKARFGNRPEPESNYLLALTLDDSIALLVGDVPLKDACATCKARDPENRQVLVTRKEYVDVDANGVSNRVYSTSATIAGRTRELEVEYHGGGGDDSENSRLLFSFDGEKVLEVKRLRWKFRGNERVEIGEGGHVQITWDVHNWLFKKEEYQHYYNNYNNSYNNKNKNYYYNNLGKSDDGHAVFMFKFEEDEDFGETYWNDSECGKTGKSLLLSSSSFSLSSSLGSFGGSSSVMEWSNLEESELIGPVGLTLLVHAWRIGI* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3174 362 PANTHER OS08G0422401 PROTEIN 2 359 - -
Ahy16g3174 362 PANTHER EXPRESSED PROTEIN 2 359 IPR008586 -
Ahy16g3174 362 Pfam Plant protein of unknown function (DUF868) 35 359 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3174 Ahy-Chr16 148096579 148098169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3174 43 339 EF-hand Containing Proteins AT5G28150 27.759 1.30e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3174 - - aip:107605403 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3174 16 148096579 148098169 Ahy6g2478 6 109613720 109615252 hybridization
Ahy16g3174 16 148096579 148098169 Ahy20g2060 20 116245433 116246865 PCT
Ahy16g3174 16 148096579 148098169 Ahy10g1614 10 93405048 93406867 PCT
Ahy20g2060 20 116245433 116246865 Ahy16g3174 16 148096579 148098169 PCT
Ahy10g1614 10 93405048 93406867 Ahy16g3174 16 148096579 148098169 PCT