Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2441 ATGGCTTTGAACACTACCAAGCTTTTTGCCACAATTCTTGTTGTGTCACTCCTTTCAACACCTTTATTAACCAATGCATGTGGATCATGCAAGGCACCAACTCCGCCACCACCAAAAGCAAAATGCCCCAAAGACACATTGAAATTAGGTGTTTGTGCTGATGTCTTAGGACTTGTTAACGTTATTGTTGGTTCCCCAGCTTCAAGCAAGTGTTGTGCATTGCTTCAAGGCTTGGTTGATTTGGAAGCAGCACTTTGTTTGTGCACCGCTATTAAGGCCAATGTTCTTGGCATCAACTTAGATATCCCTCTCACTCTCAGCTTGCTCCTCAGTGCTTGTCAAAAATCACTTCCTTCTGGCTTCCAATGTTGA 372 0.4355 MALNTTKLFATILVVSLLSTPLLTNACGSCKAPTPPPPKAKCPKDTLKLGVCADVLGLVNVIVGSPASSKCCALLQGLVDLEAALCLCTAIKANVLGINLDIPLTLSLLLSACQKSLPSGFQC* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2441 123 CDD HPS_like 45 123 IPR027923 -
Ahy6g2441 123 Gene3D - 42 123 IPR036312 -
Ahy6g2441 123 SMART aai_6 42 123 IPR016140 -
Ahy6g2441 123 PANTHER LIPID TRANSFER PROTEIN 25 123 - -
Ahy6g2441 123 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 45 123 IPR036312 -
Ahy6g2441 123 Pfam Hydrophobic seed protein 42 123 IPR027923 -
Ahy6g2441 123 PANTHER - 25 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2441 Ahy-Chr6 108923777 108924148 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2441 16 123 Acyl Lipid Metabolism Gene Families AT4G22490 37.963 8.82e-19 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2441 - - gmx:100306307 160.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3142 16 147525135 147526212 Ahy6g2441 6 108923777 108924148 hybridization
Ahy6g2441 6 108923777 108924148 Ahy18g2723 18 130633290 130634698 PCT
Ahy6g2441 6 108923777 108924148 Ahy8g2468 8 47414253 47415592 PCT
Ahy18g2723 18 130633290 130634698 Ahy6g2441 6 108923777 108924148 PCT
Ahy8g2468 8 47414253 47415592 Ahy6g2441 6 108923777 108924148 PCT