Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2433 ATGGCACACACTAGCTTAATAATGCCGAACCCTAACCACGCTTCCTCTCCTTCTCGATCACCCTTGTCGATTCAATTCTCTTCGATCCCAACCATGGACCGCATTTTCTCCAGTAAGAATTTCCTTTATAATAGGCTTCGATCTCAGCCTCTCAGCCTTACTGTTCTCAAATTGGATGGATCTACCTTCGATATTCAAGTTGAGAAGACAGCAACTATTGCTGAGCTTAAGGAGGCGGTGAAGGTGGTGTTCAGTCACATGCCTCAGAAGGGGCCAGGGAAGATTTCATGGCCACATGTTTGGCGGCAGTTTTGCTTATGCTATGATGGACAGAAGCTTGTCAAAGATGACGATTACCTGAGAAATTATGGCATCAAGGACGGTGATCAGCTTCGTTTCATCCGCCATGTCTCAAACTATTATAGTGCTCGAAGAAGAAAGCGATCAAAGAAACGAGTTTTCCATTTTAAACAGCACAGCAGAAAAATGTCCTTGCACTATCTGAGTGACATAAATGGAAAGTGCAGGTCATCCTCGCAAGTGAATAGTTATCAACCTAAAGAACATAGTGATGATGATGAAGAAGAAGAAATTTGTTCCGATGAGGTAGCCACTGAGGATAGGAAGATCGAGCTGTACAATAAAGTACGAGTTCATGTTGGAAAGAACAAGTTAACCAGCTTTGTTGCAGAGTTATTCTCATACAACAGGCTGCCCATTGTACCGAAAACGAGAACTCAAAGTAGGATATTCTTCCCCTCAGTGGTCGCCAAATGTTTACTAGGAAGTTTTAGAAAGATGAGAAGAGTCATAAGCTTTCGCAGGAGGGGACACTATCCTTGGAGGGATATCAGAAGACAGTATTGA 867 0.4302 MAHTSLIMPNPNHASSPSRSPLSIQFSSIPTMDRIFSSKNFLYNRLRSQPLSLTVLKLDGSTFDIQVEKTATIAELKEAVKVVFSHMPQKGPGKISWPHVWRQFCLCYDGQKLVKDDDYLRNYGIKDGDQLRFIRHVSNYYSARRRKRSKKRVFHFKQHSRKMSLHYLSDINGKCRSSSQVNSYQPKEHSDDDEEEEICSDEVATEDRKIELYNKVRVHVGKNKLTSFVAELFSYNRLPIVPKTRTQSRIFFPSVVAKCLLGSFRKMRRVISFRRRGHYPWRDIRRQY* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2433 288 Pfam Ubiquitin-like domain 52 137 IPR040610 -
Ahy6g2433 288 ProSiteProfiles Ubiquitin domain profile. 51 134 IPR000626 GO:0005515
Ahy6g2433 288 PANTHER - 4 284 - -
Ahy6g2433 288 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 4 284 IPR039690 GO:0000398|GO:0005689
Ahy6g2433 288 MobiDBLite consensus disorder prediction 177 196 - -
Ahy6g2433 288 CDD Ubl_SNRNP25 51 136 IPR040610 -
Ahy6g2433 288 MobiDBLite consensus disorder prediction 1 20 - -
Ahy6g2433 288 SUPERFAMILY Ubiquitin-like 48 140 IPR029071 -
Ahy6g2433 288 Gene3D - 45 144 - -
Ahy6g2433 288 SMART ubq_7 51 136 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2433 Ahy-Chr6 108838457 108842034 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2433 - - ahf:112697496 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3131 16 147402455 147405891 Ahy6g2433 6 108838457 108842034 hybridization
Ahy6g2433 6 108838457 108842034 Ahy18g2707 18 130373859 130374927 PCT
Ahy6g2433 6 108838457 108842034 Ahy8g2451 8 47250852 47251940 PCT
Ahy18g2707 18 130373859 130374927 Ahy6g2433 6 108838457 108842034 PCT
Ahy8g2451 8 47250852 47251940 Ahy6g2433 6 108838457 108842034 PCT