Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2707 ATGGCAAACATGATTATGGCTTCCTCAAGATCCTTGATCAGAACCTCCACCACTTCCCCTTCCCCGGCACCATCACAAAAGCTCCCCATTAGCAATCACATTACTCTCCCAAGAGTCCAATTACCCCTCCTCAAGAACCTCTCCCTCCAAATCCCAATCCCAAACACTAATCAAACCCTAAAATCCCTCTCCGTACTGGCAGCCACATCTCTAGCGCTCGCGCCTCCGTCGCTCGCGGCGGAGATCGAGAAGGCGGCGCTCTTTGACTTCAACCTGACCCTTCCAATCATCATGGTTGAGTTCTTGCTCCTCATGGTGGCGCTAGACAAGGTGTACTTCACTCCTCTGGGGAAATTCATGGACGAGAGGGATGCCGCCATTAGGGAGAAGCTGAGCGGCGTGAAGGACACGTCAGAGGAGGTGAAACAACTGGAGGAGCAGGCCGTGGCCGTGATGAAGGCAGCGAGGGCTGAGATATCGGCGGCGTTGAATCAGATGAAGAAGGAGACGCAAGCCGAGGTGGAGCAGAAGATTGCAGAAGGGAGGAAGAAGGTGGAGGTTGAGCTTCAAGAGGCTCTGGCCAGTTTGGAGCAGCAGAAGGAAGAAACCATCAAATCTCTTGATTCTCAGATAACTGCTCTTAGCCAAGAAATTGTAAAGAAGGTTCTTCCCACTGTTTGA 681 0.5228 MANMIMASSRSLIRTSTTSPSPAPSQKLPISNHITLPRVQLPLLKNLSLQIPIPNTNQTLKSLSVLAATSLALAPPSLAAEIEKAALFDFNLTLPIIMVEFLLLMVALDKVYFTPLGKFMDERDAAIREKLSGVKDTSEEVKQLEEQAVAVMKAARAEISAALNQMKKETQAEVEQKIAEGRKKVEVELQEALASLEQQKEETIKSLDSQITALSQEIVKKVLPTV* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2707 226 Coils Coil 182 217 - -
Ahy18g2707 226 Coils Coil 127 180 - -
Ahy18g2707 226 CDD ATP-synt_Fo_b 93 223 - -
Ahy18g2707 226 MobiDBLite consensus disorder prediction 1 27 - -
Ahy18g2707 226 PANTHER ATP SYNTHASE SUBUNIT B', CHLOROPLASTIC 1 225 - -
Ahy18g2707 226 PANTHER ATP SYNTHASE SUBUNIT B', CHLOROPLASTIC 1 225 - -
Ahy18g2707 226 Hamap ATP synthase subunit b [atpF]. 88 225 IPR002146 GO:0015078|GO:0015986|GO:0045263
Ahy18g2707 226 Hamap ATP synthase subunit b' [atpF2]. 87 224 IPR034679 GO:0015078|GO:0015986|GO:0045263
Ahy18g2707 226 Pfam ATP synthase B/B' CF(0) 94 223 IPR002146 GO:0015078|GO:0015986|GO:0045263
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2707 Ahy-Chr18 130373859 130374927 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2707 K02109 - zju:107421175 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2707 18 130373859 130374927 Ahy18g2707 18 130373859 130374927 ECH
Ahy18g2707 18 130373859 130374927 Ahy8g2451 8 47250852 47251940 hybridization
Ahy16g3131 16 147402455 147405891 Ahy18g2707 18 130373859 130374927 PCT
Ahy6g2433 6 108838457 108842034 Ahy18g2707 18 130373859 130374927 PCT
Ahy18g2707 18 130373859 130374927 Ahy16g3131 16 147402455 147405891 PCT
Ahy18g2707 18 130373859 130374927 Ahy6g2433 6 108838457 108842034 PCT