Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0993 ATGGGAGCTGGCGGCCGAACCTCTGTTCCTCCTTCAAACAGGACGGTCGAGGCTGACTATGCGAAGCGAGTTCCGCATGAAAAACCTCCCTTCAGTCTCAGCCAAGTCAAGAAGGCCATCCCACCTCACTGTTTTCAGCGTTCTGTTATCCGCTCATTCTCCTATGTTGTCTATGATCTCACCATAGCCTTTTGCCTCTACTATGCCGCCACCAATTACTTCCACAAACTCTCTTCCCCTTTATTTTACTTGGCCTGGCTTCTCTATGGGGCTGTCCAAGGTTGCATCCTTACCGGTGTTTGGGTCATCGCGCACGAATGTGGCCACCATGCATTCAGTGATTATCAATGGCTTGATGATACAGTTGGCCTTGTTCTCCACTCTGGCCTCTTGGTCCCTTACTTTTCATGGAAATACAGCCACCGTCGCCACCACTCCAACACCGGTTCCCTTGACAGGGATGAAGTCTTTGTGCCAAAGAAGAAGTCTAGTATTGCATGGTGGTCTAAGTACCTTAATAACCCACTAGGAAGAGTCCTCACACTCACTATTACCCTCACCCTTGGTTGGCCACTTTACTTGGCTTTTAATGTCTCGGGAAGGCCTTACGATAGGTTTGCTTGCCACTATGACCCATATGGTCCAATCTACTCCGATCGCGAACGACTTCAAATATACATATCAGATGCTGGAGTGCTTGCAGTTTCCTATGGTCTTATCCGTCTTGTCATGGCAAAAGGCCTTGCCTGGGTTGTGGCTGTTTATGGTGTTCCATTGCTAGTGGTCAATGGATTCTTGGTGTTGATCACATATTTGCAGCACACTCACCCTGCATTGCCACATTACGATTCATCCGAGTGGGACTGGTTGAGGGGAGCATTGGCGACCGTGGACAGAGACTATGGAATCCTGAACAAGGTCTTCCATAACATCACTGACACACATGTGGCACATCACTTGTTCTCCACAATGCCGCATTACCATGCAATGGAGGCTACAAATGCAATAAAACCAATTTTGGGAGAGTATTATCGGTTCGATGGGACTCCTTTTTACAAGGCAATGTGGAGAGAGGCGAAAGAGTGTCTCTATGTTGAGTCGGACCAGGGTGCTCAGAATAAAGGTGTATTCTGGTACAACAATAAGTTGTGA 1152 0.4792 MGAGGRTSVPPSNRTVEADYAKRVPHEKPPFSLSQVKKAIPPHCFQRSVIRSFSYVVYDLTIAFCLYYAATNYFHKLSSPLFYLAWLLYGAVQGCILTGVWVIAHECGHHAFSDYQWLDDTVGLVLHSGLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKKKSSIAWWSKYLNNPLGRVLTLTITLTLGWPLYLAFNVSGRPYDRFACHYDPYGPIYSDRERLQIYISDAGVLAVSYGLIRLVMAKGLAWVVAVYGVPLLVVNGFLVLITYLQHTHPALPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATNAIKPILGEYYRFDGTPFYKAMWREAKECLYVESDQGAQNKGVFWYNNKL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0993 383 PANTHER OLEATE HYDROXYLASE FAH12 1 383 - -
Ahy6g0993 383 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 1 383 - -
Ahy6g0993 383 CDD Delta12-FADS-like 47 329 - -
Ahy6g0993 383 Pfam Fatty acid desaturase 83 344 IPR005804 GO:0006629
Ahy6g0993 383 Pfam Domain of unknown function (DUF3474) 24 66 IPR021863 GO:0016717
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0993 Ahy-Chr6 13103082 13108671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0993 1 383 Lipid Metabolism Gene Families AT3G12120 76.240 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0993 K10256 - gmx:100805040 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0338 16 6870369 6876110 Ahy6g0993 6 13103082 13108671 hybridization
Ahy6g0993 6 13103082 13108671 Ahy19g0980 19 15544347 15546289 PCT
Ahy19g0980 19 15544347 15546289 Ahy6g0993 6 13103082 13108671 PCT