Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0980 ATGGGGTCTGGTGGTCATTCTGCCGGGAAGAGGAAGTCAAAAACATTATCATCAAGAAAAGAAGGAGAAGTTTTGAAGAGAGCACCTCACACAAAACCACCCTTCACTCTCGGCGAACTCAGAAAAGCAATTCCTCCACATTGCTTTAAACGCTCCGTCGCTCGCTCATTCTCCTACGTCTTCTTCGACCTCACCATAGCCTCAATTTTCGCCTATGTCGCCATCAACTACTTCTGGAATCTTCCACACAACCTCTCCTTCTTGGCTTGGCCTTTGTACTGGTTCGCCCAAGGCGCCGTCATGACCGGCGTCTGGGTCATTGCACACGAGTGCGGCCACCATGCCTTCAGCGACTACCAATGGTTAGATGACCTTGTCGGCTTCATTCTCCATTCTTTCCTTCTCGTCCCTTACTTTTCCTGGAAGCACAGCCACCGTCGCCACCATTCCAACACCGGATCCGTCGACCGCGACGAGGTGTTCGTCCCAAAGCGAAGATCCAGCATCCGTTGGTACACAAAGTATCTTAACAATCCCGTAGGAAGAACCATCACACTATCAGTTACTCTCTTTTTCGGGTGGCCTCTGTATCTCGCTTTCAATGTTTCCGGAAGGAAGTACGATCGATTCGCCTGCCACTACGATCCGTACGGTCCGATTTACTCCGATCGCGAGAGGTTTCAGATATTCTTGTCGGACGTCGGTGTCCTGGCCGCGTTCTATGGCATTTACCGACTGGTCTTAGCTCAAGGCCTTGTTTGGACGCTCTGTGTTTATGGAATGCCGTTGGCGGTGGTTAACGCACTTTTGGTGCTAATTACTTACTTGCAGCACACGCATCCTTCTTTGCCTCACTATGATTCCAATGAATGGGAGTGGTTTAAGGGAGCTTTGTCAACAATAGATAGAGATTATGGATGGATTTTGAATAAGGTTCTTCATCACATCACTGATACGCATGTTACGCATCACTTGTTCTCTACAATGCCACACTATCATGCAATGGAAGCAACCAATGCTATTAAACCAATTTTACGAGAATACTATCAGTTTGATGGCACTCCAATTTACAAGGCCCTATGGAGAGAGGCCAAAGAGTGCATGTATGTTGAGCCTGATGATGATAGCGACAACAAAGGTGTTCTTTGGTATAATAAGCTTTAA 1164 0.4751 MGSGGHSAGKRKSKTLSSRKEGEVLKRAPHTKPPFTLGELRKAIPPHCFKRSVARSFSYVFFDLTIASIFAYVAINYFWNLPHNLSFLAWPLYWFAQGAVMTGVWVIAHECGHHAFSDYQWLDDLVGFILHSFLLVPYFSWKHSHRRHHSNTGSVDRDEVFVPKRRSSIRWYTKYLNNPVGRTITLSVTLFFGWPLYLAFNVSGRKYDRFACHYDPYGPIYSDRERFQIFLSDVGVLAAFYGIYRLVLAQGLVWTLCVYGMPLAVVNALLVLITYLQHTHPSLPHYDSNEWEWFKGALSTIDRDYGWILNKVLHHITDTHVTHHLFSTMPHYHAMEATNAIKPILREYYQFDGTPIYKALWREAKECMYVEPDDDSDNKGVLWYNKL* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0980 387 Pfam Domain of unknown function (DUF3474) 21 66 IPR021863 GO:0016717
Ahy19g0980 387 MobiDBLite consensus disorder prediction 1 31 - -
Ahy19g0980 387 PANTHER OLEATE HYDROXYLASE FAH12 5 386 - -
Ahy19g0980 387 CDD Delta12-FADS-like 51 334 - -
Ahy19g0980 387 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 5 386 - -
Ahy19g0980 387 Pfam Fatty acid desaturase 89 350 IPR005804 GO:0006629
Ahy19g0980 387 MobiDBLite consensus disorder prediction 14 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0980 Ahy-Chr19 15544347 15546289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0980 1 386 Lipid Metabolism Gene Families AT3G12120 69.430 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0980 K10256 - pop:7479530 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0338 16 6870369 6876110 Ahy19g0980 19 15544347 15546289 PCT
Ahy6g0993 6 13103082 13108671 Ahy19g0980 19 15544347 15546289 PCT
Ahy19g0980 19 15544347 15546289 Ahy16g0338 16 6870369 6876110 PCT
Ahy19g0980 19 15544347 15546289 Ahy6g0993 6 13103082 13108671 PCT