Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0338 ATGGGAGCTGGCGGCCGAACCTCTGTTCCTCCTTCAAACAGGACGGTCGAGGCTGACTATGCGAAGCGAGTTCCGCATGAAAAACCTCCCTTCAGTCTCAGCCAAGTCAAGAAGGCCATCCCACCTCACTGTTTTCAGCGTTCTGTTATCCGCTCATTCTCCTATGTTGTCTATGATCTCACCATAGCCTTTTGCCTCTACTATGCCGCCACCAATTACTTCCACAAACTCTCTTCCCCTTTATTTTACTTGGCCTGGCTTCTCTACGGGGCTGTCCAAGGTTGCATCCTTACCGGTGTTTGGGTCATCGCACACGAATGTGGCCACCATGCATTCAGTGATTATCAATGGCTTGATGATACGGTTGGCCTTGTTCTCCACTCTGGCCTCTTGGTCCCTTACTTTTCATGGAAATACAGCCACCGTCGCCACCACTCCAACACCGGTTCCCTTGACAGGGATGAAGTCTTTGTGCCAAAGAAAAGGTCTAGTATTGCATGGTGGTCTAAGTACCTTAATAACCCACTAGGAAGAGTGCTCACACTCACTATTACCCTCACCCTTGGTTGGCCACTTTACTTGGCTTTTAATGTCTCGGGAAGGCCTTATGATAGGTTTGCTTGCCACTATGACCCATATGGTCCAATCTACTCCGATCGCGAACGACTTCAAATATACATATCAGATGCTGGAGTGCTTGCAGTTTCCTATGGTCTTATTCGTCTTGTCCTGGCAAAAGGCCTTGCCTGGGTTGTGGCTGTTTATGGTGTTCCATTGCTAGTGGTCAATGGATTCTTGGTGTTGATCACATATTTGCAGCACACTCACCCTGCATTGCCACATTACGATTCATCCGAGTGGGACTGGTTGAGGGGAGCATTGGCGACCGTGGACAGAGACTATGGAATCCTGAACAAGGTCTTCCATAACATCACTGACACACATGTGGCACATCACTTGTTCTCCACAATGCCGCATTACCATGCAATGGAGGCTACAAATGCAATAAAACCAATTTTGGGAGAGTATTATCGGTTCGATGGGACTCCATTTTACAAGGCAATGTGGAGAGAGGCGAAAGAGTGTCTCTATGTTGAGTCGGATCAGGGTGCTCAGAATAAAGGTGTATTCTGGTACAACAATAAGTTGTGA 1152 0.4783 MGAGGRTSVPPSNRTVEADYAKRVPHEKPPFSLSQVKKAIPPHCFQRSVIRSFSYVVYDLTIAFCLYYAATNYFHKLSSPLFYLAWLLYGAVQGCILTGVWVIAHECGHHAFSDYQWLDDTVGLVLHSGLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKKRSSIAWWSKYLNNPLGRVLTLTITLTLGWPLYLAFNVSGRPYDRFACHYDPYGPIYSDRERLQIYISDAGVLAVSYGLIRLVLAKGLAWVVAVYGVPLLVVNGFLVLITYLQHTHPALPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATNAIKPILGEYYRFDGTPFYKAMWREAKECLYVESDQGAQNKGVFWYNNKL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0338 383 Pfam Fatty acid desaturase 83 344 IPR005804 GO:0006629
Ahy16g0338 383 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 1 383 - -
Ahy16g0338 383 CDD Delta12-FADS-like 47 329 - -
Ahy16g0338 383 Pfam Domain of unknown function (DUF3474) 24 66 IPR021863 GO:0016717
Ahy16g0338 383 PANTHER OLEATE HYDROXYLASE FAH12 1 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0338 Ahy-Chr16 6870369 6876110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0338 1 383 Lipid Metabolism Gene Families AT3G12120 75.979 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0338 K10256 - gmx:100805040 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0338 16 6870369 6876110 Ahy16g0338 16 6870369 6876110 ECH
Ahy16g0338 16 6870369 6876110 Ahy6g0993 6 13103082 13108671 hybridization
Ahy16g0338 16 6870369 6876110 Ahy19g0980 19 15544347 15546289 PCT
Ahy19g0980 19 15544347 15546289 Ahy16g0338 16 6870369 6876110 PCT